{"id":"W4385761217","doi":"10.1186/s12941-023-00617-8","title":"Evaluation of the liquid colony for identification and antimicrobial susceptibility testing directly from positive blood cultures","year":2023,"lang":"en","type":"article","venue":"Annals of Clinical Microbiology and Antimicrobials","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Antimicrobial; Sepsis; Medicine; Blood culture; Gram staining; Microbiology; Gram-positive bacteria; Biology; Antibiotics; Internal medicine","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005307754,0.0001508675,0.0004155905,0.00003888831,0.0001658601,0.00002267503,0.0001974597,0.0003268639,0.000006594136],"category_scores_gemma":[0.007921369,0.0001223243,0.0001786866,0.0001587638,0.0006316708,0.00001170281,0.0001942054,0.00009639235,0.00000138791],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000001789025,"about_ca_system_score_gemma":0.0001312048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007761442,"about_ca_topic_score_gemma":0.0001175435,"domain_scores_codex":[0.9972839,0.0008726235,0.001033927,0.0005543992,0.00005940118,0.0001957544],"domain_scores_gemma":[0.9970831,0.000615956,0.0006964622,0.000341916,0.001218532,0.00004397966],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002278144,0.0001388232,0.01240829,0.00004492837,0.0001489757,5.779085e-8,0.00007296989,0.000009953867,0.9836789,0.00001489335,0.001690615,0.001563779],"study_design_scores_gemma":[0.0007267333,0.0002393869,0.1492524,0.00007313614,0.0001946804,0.000004027554,0.00003058259,0.000052463,0.8489437,0.0001550995,0.0002106538,0.0001171839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969186,0.0001903263,0.00003612132,0.0009231537,0.0003366802,0.0006507606,0.0009085538,0.00001445605,0.00002140245],"genre_scores_gemma":[0.9983766,0.000239899,0.0003443508,0.0003169463,0.0001534181,0.0000113692,0.0004810014,0.00001216907,0.00006426562],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1368441,"threshold_uncertainty_score":0.9483191,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.131443821382313,"score_gpt":0.4134936600988925,"score_spread":0.2820498387165795,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}