{"id":"W4385845007","doi":"10.2139/ssrn.4540276","title":"Environmental Exposures and Genetic Relatedness of Mycobacterium Kansasii in Taiwan: A Retrospective Phylogeographic Analysis","year":2023,"lang":"en","type":"preprint","venue":"SSRN Electronic Journal","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Mycobacterium kansasii; Phylogeography; Evolutionary biology; Biology; Geography; Ecology; Genetics; Mycobacterium; Phylogenetic tree; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003368415,0.0002620894,0.0002664975,0.001273802,0.000600981,0.0005471769,0.0004436484,0.0005803807,0.001311472],"category_scores_gemma":[0.001335803,0.0004803929,0.0003541422,0.001867426,0.000368269,0.0004435297,0.0007826366,0.0004440952,0.0002792913],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003533057,"about_ca_system_score_gemma":0.0003405879,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01693197,"about_ca_topic_score_gemma":0.01056315,"domain_scores_codex":[0.9996408,0.00007916123,0.00003541062,0.0001251843,0.00003461667,0.00008490784],"domain_scores_gemma":[0.9993271,0.000108089,0.000219668,0.0001071596,0.000110499,0.0001274972],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006631648,0.00002742009,0.9982389,0.000003844717,0.00003794217,0.0001266599,0.0003121792,0.00004519726,0.0005832117,0.00001401523,0.00002454332,0.0005198374],"study_design_scores_gemma":[0.000002311485,0.00005552163,0.9986721,0.000003819701,0.00002601333,0.0002106874,0.0007036512,0.0001656302,0.0000583269,0.00001406536,0.00008508531,0.000002675249],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996464,0.00004950949,0.00006464506,0.00001120263,7.731174e-7,0.00000293023,0.0001276038,0.000001081398,0.00009598791],"genre_scores_gemma":[0.9996439,0.00004400012,0.00003887206,0.000007834953,0.000001644325,0.00000378397,0.0001602522,0.000001248088,0.00009844311],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01693197,"threshold_uncertainty_score":0.03366685,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01017421027983588,"score_gpt":0.2555041683277574,"score_spread":0.2453299580479215,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}