{"id":"W4385858043","doi":"10.1371/journal.pgen.1010879","title":"Genomic diversity landscapes in outcrossing and selfing Caenorhabditis nematodes","year":2023,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; USAF Phillips Laboratory; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; University of California, Davis; University of Oregon","keywords":"Biology; Outcrossing; Selfing; Caenorhabditis elegans; Genetics; Caenorhabditis; Evolutionary biology; Genetic diversity; Gene; Ecology; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001413208,0.0001045944,0.0002286994,0.000792416,0.0002144569,0.0004662735,0.0002514883,0.0002231254,0.0004645829],"category_scores_gemma":[0.0005500265,0.000136435,0.0001637761,0.0004590875,0.0003752137,0.0004588818,0.0003009447,0.0002014537,0.00004471334],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003653247,"about_ca_system_score_gemma":0.00009698539,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001833389,"about_ca_topic_score_gemma":0.002523446,"domain_scores_codex":[0.9999448,0.00001282291,0.000003318463,0.00002161546,0.0000086444,0.000008662431],"domain_scores_gemma":[0.9997762,0.00008489189,0.00006063242,0.00001893156,0.00001972419,0.00003967746],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006988221,0.00013828,0.1360296,0.0002960584,0.0002656929,0.00115753,0.001196401,0.1394322,0.6657006,0.01931549,0.0006620966,0.03510725],"study_design_scores_gemma":[0.00004452696,0.0002578615,0.7378492,0.00003843703,0.0001026399,0.0009233652,0.0006978147,0.2116132,0.02236643,0.02192173,0.004059654,0.0001252336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969804,0.0001414674,0.002224934,0.00001954022,9.654726e-7,0.000002004564,0.0001186832,0.0000275443,0.0004845506],"genre_scores_gemma":[0.9977506,0.000104037,0.001799098,0.00001093517,0.000001406701,0.000004383165,0.0002041799,0.000008715037,0.0001165054],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001833389,"threshold_uncertainty_score":0.00364542,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01782453442363725,"score_gpt":0.2269128579353749,"score_spread":0.2090883235117376,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}