{"id":"W4385858843","doi":"10.1093/ofid/ofad436","title":"Schrödinger's Cat Paradox: <i>Bartonella</i> Serology Cannot Be Used to Speciate <i>Bartonella</i> Endocarditis","year":2023,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Bartonella species infections research","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Bartonella; Serology; Endocarditis; Bartonella henselae; Virology; Medicine; Microbiology; Cat-scratch disease; Biology; Immunology; Pathology; Disease; Internal medicine; Antibody","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005623326,0.0007069826,0.001081847,0.0009163915,0.001771306,0.000474609,0.001495161,0.0004662553,0.004944777],"category_scores_gemma":[0.0006023907,0.0007323213,0.0004410582,0.002357518,0.0006629199,0.0005347651,0.002450997,0.0006235424,0.02641363],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004446758,"about_ca_system_score_gemma":0.0004672717,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002774593,"about_ca_topic_score_gemma":0.003312963,"domain_scores_codex":[0.9945927,0.0007230466,0.0007833884,0.001424756,0.0002663041,0.002209815],"domain_scores_gemma":[0.9968491,0.0006997141,0.0002114845,0.001503765,0.0003076862,0.0004282077],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003216782,0.0006286093,0.1678821,0.00004411344,0.0009171175,0.0002063908,0.0003993548,0.0009770137,0.04427994,0.00710688,0.7730222,0.004214582],"study_design_scores_gemma":[0.004832577,0.00119233,0.06112414,0.00007919118,0.0002422538,0.0006176498,0.000722104,0.00003052661,0.03174787,0.003332244,0.8946133,0.00146583],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9020706,0.0007171249,0.00008639827,0.00747691,0.005102717,0.003170769,0.001555761,0.001631753,0.07818799],"genre_scores_gemma":[0.9801301,0.0003496962,0.00002238024,0.003097422,0.0002184864,0.001073643,0.0008938198,0.0001625472,0.01405188],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1215911,"threshold_uncertainty_score":0.9995282,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03010757855893386,"score_gpt":0.3101166894701139,"score_spread":0.2800091109111801,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}