{"id":"W4385898811","doi":"10.1007/s12602-023-10136-9","title":"The Influence of Protein Secretomes of Enterococcus durans on ex vivo Human Gut Microbiome","year":2023,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Ottawa","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Natural Sciences and Engineering Research Council of Canada; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Government of Canada","keywords":"Bacteroidetes; Firmicutes; Biology; Microbiome; Probiotic; Bacteroides; Metaproteomics; Microbiology; Ex vivo; Bifidobacterium; Bacteroides thetaiotaomicron; Gut flora; Bacteria; Proteobacteria; Metagenomics; Biochemistry; Lactobacillus; In vitro; Gene; Bioinformatics; 16S ribosomal RNA; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001830914,0.0001470099,0.0001785585,0.0001295909,0.0001314885,0.0003943352,0.00006500517,0.0001701642,0.001067632],"category_scores_gemma":[0.0003091319,0.00007920501,0.000142185,0.0001167395,0.0001962491,0.0001929637,0.0002181073,0.0002549811,0.0001554312],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001229938,"about_ca_system_score_gemma":0.0001299931,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008076437,"about_ca_topic_score_gemma":0.0008137035,"domain_scores_codex":[0.9998823,0.00004357186,0.000006896529,0.00002223994,0.00002021283,0.00002462517],"domain_scores_gemma":[0.9998882,0.00003745363,0.00001885154,0.00001360375,0.0000135079,0.0000284704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001786391,0.00002783173,0.003072745,0.00002062293,0.00001139853,0.00006042705,0.00004224812,0.00007570653,0.9930969,0.00004954739,0.00002339183,0.001732747],"study_design_scores_gemma":[0.00004242405,0.0007917951,0.1770803,0.00001331744,0.00005417396,0.0005461872,0.00051064,0.001702825,0.8170927,0.0001768186,0.001972614,0.0000161881],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991376,0.0002558324,0.0001394539,0.0000310478,0.000005457611,0.000001870617,0.0001583139,0.000002315166,0.0002680001],"genre_scores_gemma":[0.9989527,0.0001457711,0.0001717091,0.000021315,0.00000296477,0.000004053976,0.0002258285,0.000004184878,0.0004714564],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001067632,"threshold_uncertainty_score":0.00357163,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007817184112946726,"score_gpt":0.2502621727165047,"score_spread":0.242444988603558,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}