{"id":"W4385951874","doi":"10.1016/j.modpat.2023.100305","title":"Comprehensive Molecular Characterization of Polymorphous Adenocarcinoma, Cribriform Subtype: Identifying Novel Fusions and Fusion Partners","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"ca_institutions":"Toronto General Hospital; University Health Network; Sinai Health System; University of Toronto","funders":"National Cancer Institute; National Institutes of Health","keywords":"Cribriform; Fluorescence in situ hybridization; Fusion gene; Biology; Adenocarcinoma; Gene; DNA sequencing; Computational biology; Pathology; Genetics; Carcinoma; Cancer; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000453597,0.0003887604,0.000441933,0.001513199,0.0005612992,0.0009952267,0.0003797046,0.0005850816,0.001699448],"category_scores_gemma":[0.000592285,0.0002240961,0.0004465241,0.001141144,0.0003250501,0.0004733742,0.0005033207,0.0006783472,0.0004625022],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006162942,"about_ca_system_score_gemma":0.000613874,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001751633,"about_ca_topic_score_gemma":0.003493358,"domain_scores_codex":[0.999663,0.0000195376,0.0000325898,0.00008360288,0.0001397476,0.00006155291],"domain_scores_gemma":[0.9997928,0.00003940972,0.00005603569,0.00003536798,0.00004259033,0.00003392066],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000364985,0.00006753997,0.05573167,0.0003284061,0.0001727283,0.002734926,0.0002429203,0.0008353214,0.8791267,0.001327573,0.001594487,0.05747271],"study_design_scores_gemma":[0.0001011166,0.0005346658,0.3538356,0.0001658671,0.000960221,0.0517549,0.001311032,0.01261604,0.4808814,0.003597766,0.09416284,0.00007862598],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9699342,0.01114662,0.01013929,0.0006150852,0.00005540956,0.0001177269,0.003486508,0.0002180646,0.004287041],"genre_scores_gemma":[0.9840501,0.003379475,0.006796374,0.0001851365,0.00002613896,0.00005294465,0.00383129,0.00003924701,0.001639265],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001751633,"threshold_uncertainty_score":0.00568521,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05371702733099903,"score_gpt":0.3125806710976573,"score_spread":0.2588636437666583,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}