{"id":"W4385972336","doi":"10.1038/s43705-023-00287-9","title":"Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog","year":2023,"lang":"en","type":"article","venue":"ISME Communications","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Center for Northern Studies","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies; AUTO21 Network of Centres of Excellence; Government of Canada; Parks Canada; Compute Canada; Canada First Research Excellence Fund; ArcticNet; Université Laval","keywords":"Metagenomics; Biology; Ecology; Biodiversity; Microbiome; Biogeochemical cycle; Arctic; Biome; Ecosystem; Phylum; Bacteria; Paleontology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001667886,0.00008463793,0.0001396678,0.00005435013,0.0002516966,0.00001574801,0.0007608911,0.00006406873,0.00006070466],"category_scores_gemma":[0.00002875946,0.00006257213,0.00001980448,0.0004734621,0.0006687633,0.00009925802,0.0009421857,0.0002748341,0.00001028157],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003416307,"about_ca_system_score_gemma":0.00001209464,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009715199,"about_ca_topic_score_gemma":0.06129457,"domain_scores_codex":[0.9993249,0.0002148321,0.0001448871,0.0001240088,0.00003768734,0.0001536937],"domain_scores_gemma":[0.9987174,0.0003231369,0.00006886601,0.0008571043,0.000008209349,0.00002532169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003295036,0.0000756174,0.02463729,0.000004853315,0.00001543465,2.86517e-7,0.005095021,0.0005911354,0.9682642,0.0005883566,0.0006296725,0.00006518234],"study_design_scores_gemma":[0.0006585784,0.0001278363,0.9891951,0.00003687305,0.00002191889,0.00001278692,0.00138009,0.0004203688,0.003356049,0.0009075628,0.00367535,0.0002074822],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955912,0.000005922063,0.00004058419,0.003721333,0.0000238172,0.0001998627,0.0001692014,0.00001256302,0.0002354915],"genre_scores_gemma":[0.9986689,0.00002520088,0.000892701,0.0002699275,0.000006506811,0.000007017321,0.00009284331,0.00000614744,0.00003075316],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9649081,"threshold_uncertainty_score":0.9558343,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02423774971908058,"score_gpt":0.24815318807799,"score_spread":0.2239154383589094,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}