{"id":"W4386031784","doi":"10.1186/s12859-023-05436-4","title":"BioLegato: a programmable, object-oriented graphic user interface","year":2023,"lang":"en","type":"article","venue":"BMC Bioinformatics","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Genome Prairie; Genome Canada","keywords":"Computer science; Copying; Graphical user interface; Programming language; Software; Pipeline (software); Process (computing); User interface; Set (abstract data type); Simple (philosophy); Interface (matter); Usability; Software engineering; Field (mathematics); Source code; Debugger; Java; Human–computer interaction; Debugging; Operating system","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007457756,0.0003346289,0.0002760074,0.0003398769,0.0001943403,0.0001420011,0.0005937793,0.0003692714,0.00003448965],"category_scores_gemma":[0.000547306,0.000276982,0.0002200033,0.001054749,0.0003750724,0.0000237857,0.0005905599,0.0002514009,0.0009382043],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002487289,"about_ca_system_score_gemma":0.0002758847,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001340346,"about_ca_topic_score_gemma":0.00006706084,"domain_scores_codex":[0.9972999,0.00005423096,0.0007744727,0.0002914743,0.0006369405,0.0009429595],"domain_scores_gemma":[0.99837,0.0000425531,0.0001884462,0.000750084,0.0002567398,0.0003921917],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001687695,0.001429837,0.06997695,0.007644285,0.001555527,0.00004421703,0.006684341,0.00207982,0.06839734,0.002875462,0.6156406,0.221984],"study_design_scores_gemma":[0.002468325,0.001445153,0.004106505,0.0001510221,0.00005205075,0.00004722861,0.004416453,0.1082582,0.04309778,0.0001704719,0.8347185,0.001068328],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7223692,0.0008898238,0.2472234,0.0008289804,0.002634977,0.003547455,0.000427149,0.0009774566,0.02110153],"genre_scores_gemma":[0.7082315,0.006247342,0.2476581,0.00208459,0.001536286,0.0005496991,0.005528115,0.000307594,0.02785675],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2209156,"threshold_uncertainty_score":0.9999682,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02066286574121597,"score_gpt":0.2931417395023609,"score_spread":0.272478873761145,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}