{"id":"W4386053907","doi":"10.1101/2023.08.21.554191","title":"The nasopharyngeal virome in adults with acute respiratory infection","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Respiratory viral infections research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Ministry of Education and Science of the Republic of Kazakhstan","keywords":"Human virome; Rhinovirus; Biology; Human bocavirus; Virology; Microbiology; Virus; Enterovirus; Immunology; Metagenomics; Respiratory tract infections; Respiratory system; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002679019,0.000283891,0.0004200187,0.0006856906,0.0003334046,0.0006304288,0.0002093321,0.0003722819,0.001060677],"category_scores_gemma":[0.0007602702,0.0001368488,0.0002886414,0.0006811928,0.0002320036,0.0003996491,0.0007420869,0.0002439591,0.0002401098],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002095042,"about_ca_system_score_gemma":0.000149701,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001724943,"about_ca_topic_score_gemma":0.002666172,"domain_scores_codex":[0.9997345,0.00005054014,0.000022964,0.00009990823,0.00004134186,0.00005075663],"domain_scores_gemma":[0.9997415,0.00005594979,0.0001009997,0.00001917721,0.00004705504,0.00003531351],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003467723,0.00002578412,0.9531957,0.0001282513,0.0001243783,0.0002702925,0.0005573095,0.0002247779,0.03484254,0.0000557183,0.000294288,0.009934268],"study_design_scores_gemma":[0.000004706803,0.000157757,0.992427,0.00004264924,0.00007174216,0.001175179,0.001163188,0.001176963,0.002471672,0.0002029763,0.001097557,0.000008688633],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976034,0.0006778321,0.0003953495,0.00003565255,0.000006810524,0.00001120337,0.0009874048,0.000008773739,0.0002735998],"genre_scores_gemma":[0.9974849,0.0002626997,0.0008606108,0.00007018269,0.00001266234,0.00001292908,0.001183098,0.000005128501,0.0001078098],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001724943,"threshold_uncertainty_score":0.003548265,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03190218139212672,"score_gpt":0.2985927442434813,"score_spread":0.2666905628513545,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}