{"id":"W4386070393","doi":"10.3390/epigenomes7030019","title":"Multiomics Data Analysis Identified CpG Sites That Mediate the Impact of Smoking on Cardiometabolic Traits","year":2023,"lang":"en","type":"article","venue":"Epigenomes","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Alliance de recherche numérique du Canada","keywords":"Expression quantitative trait loci; CpG site; Epigenome; Biology; Quantitative trait locus; Gene; SNP; DNA methylation; Genome-wide association study; Genetic association; Genetics; Bioinformatics; Computational biology; Gene expression; Single-nucleotide polymorphism; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001173667,0.0004997222,0.0006653779,0.001320237,0.0005573918,0.0007778799,0.0004780751,0.0004389189,0.004734178],"category_scores_gemma":[0.0030823,0.0002274359,0.001686646,0.001418056,0.000235143,0.0002744484,0.0008724768,0.0008974223,0.0004390853],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004056511,"about_ca_system_score_gemma":0.001095401,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008630957,"about_ca_topic_score_gemma":0.01889149,"domain_scores_codex":[0.9991375,0.0001790257,0.00005582568,0.0003795389,0.0001247725,0.0001231752],"domain_scores_gemma":[0.9987367,0.0007187561,0.0001770015,0.0001626374,0.0001221041,0.00008271537],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001449667,0.0002012176,0.7134644,0.0008258668,0.004671014,0.0007665256,0.0005082138,0.006155554,0.1911308,0.002005492,0.002830934,0.07599037],"study_design_scores_gemma":[0.0000875323,0.0002667158,0.9324043,0.0001043489,0.002172702,0.0004424246,0.0002519172,0.02604495,0.02676644,0.003853033,0.007543768,0.00006202366],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8820534,0.002280826,0.0702137,0.0007492916,0.0001044015,0.0001655919,0.04047898,0.00113104,0.002822792],"genre_scores_gemma":[0.9568119,0.0003563102,0.02823505,0.0003266316,0.00001991441,0.0001354504,0.01278198,0.0001350188,0.001197783],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008630957,"threshold_uncertainty_score":0.01716143,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08773305790152308,"score_gpt":0.3596908812508949,"score_spread":0.2719578233493719,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}