{"id":"W4386122298","doi":"10.1101/2023.08.23.554508","title":"PROTEIN- <i>O</i> -MANNOSYLATION BY NON-SEC/TAT SECRETION TRANSLOCONS IN ACTINOBACTERIA","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; University of Alberta","funders":"","keywords":"Actinobacteria; Glycosylation; Virulence; Biology; Mycobacterium tuberculosis; Secretion; Microbiology; Bacteria; Mutant; Corynebacterium glutamicum; Mycobacterium; Biochemistry; Genetics; Gene; Tuberculosis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001311667,0.000328661,0.0001832152,0.0001702962,0.0001559786,0.0003099432,0.0001075406,0.0001730113,0.0002985337],"category_scores_gemma":[0.0001945863,0.0001061693,0.0003128675,0.0001971529,0.0001284914,0.0001415075,0.0002465888,0.0002641777,0.0002474385],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002675659,"about_ca_system_score_gemma":0.0001246811,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007381243,"about_ca_topic_score_gemma":0.0003677992,"domain_scores_codex":[0.9998668,0.00002831529,0.00001374015,0.00002501553,0.00002743093,0.00003863677],"domain_scores_gemma":[0.9998325,0.00002336623,0.0000619047,0.00001461547,0.00003579907,0.00003182696],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001330943,0.00001122843,0.001618218,0.00003006497,0.00000438314,0.0001228083,0.00002625984,0.00008023834,0.9969952,0.00006897439,0.00001804083,0.0008915146],"study_design_scores_gemma":[0.00001684748,0.0004244361,0.06512513,0.00002647575,0.00002453172,0.001090016,0.0003005965,0.004098481,0.9262043,0.0002734416,0.002402392,0.00001337473],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973038,0.0004407038,0.001585802,0.00002723579,0.000005310698,0.000008284571,0.0001272468,0.00001637402,0.0004852127],"genre_scores_gemma":[0.9972711,0.000207607,0.001245354,0.00001582691,0.000002872352,0.000006097389,0.0003989863,0.000009439914,0.0008428252],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007381243,"threshold_uncertainty_score":0.001941323,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01411171506712662,"score_gpt":0.2444651576719482,"score_spread":0.2303534426048216,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}