{"id":"W4386310387","doi":"10.20944/preprints202308.1996.v1","title":"Two-fold ND5 genes, three-fold control regions, lnc RNA, and the “missing” ATP8 were surprisingly found in the mitogenomes of Polypedates megacephalus (Rhacophridae: Polypedates)","year":2023,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Aquatic Invertebrate Ecology and Behavior","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Carleton University","funders":"Zhejiang Normal University; National Natural Science Foundation of China","keywords":"Biology; Gene; Coding region; Gene expression; RNA; Genetics; Molecular biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.003836905,0.0006520285,0.001003078,0.0001380219,0.0004687854,0.0000922097,0.001996476,0.0005386851,0.0021496],"category_scores_gemma":[0.0004328525,0.0004383199,0.0002931067,0.0004134677,0.001824223,0.0002125869,0.002707962,0.001269134,0.001646182],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002308196,"about_ca_system_score_gemma":0.0001795747,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01119461,"about_ca_topic_score_gemma":0.00496754,"domain_scores_codex":[0.9950747,0.0009922686,0.001113398,0.001326519,0.0007280019,0.0007651523],"domain_scores_gemma":[0.9958667,0.001075309,0.0008122481,0.002050927,0.00004882457,0.0001460576],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003381228,0.0002449994,0.9871422,0.00007913035,0.0001982572,0.00007689654,0.001789785,0.001325095,0.005897386,0.0009159716,0.0005885091,0.001403636],"study_design_scores_gemma":[0.003464316,0.00005040908,0.9737501,0.0001763547,0.0005467389,0.00005412894,0.0008241622,0.001808852,0.003621429,0.01400075,0.0009869783,0.0007157363],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9871328,0.001797316,0.0001628287,0.005704812,0.0007299166,0.002054887,0.0000549304,0.0000999957,0.002262465],"genre_scores_gemma":[0.9969082,0.000482055,0.0001757133,0.0007176995,0.0001578745,0.0003140271,0.00003677798,0.00007185881,0.001135804],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01339207,"threshold_uncertainty_score":0.9998069,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08963238045288027,"score_gpt":0.3163856619031301,"score_spread":0.2267532814502498,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}