{"id":"W4386533766","doi":"10.1126/sciadv.adh8990","title":"Epigenetic variations are more substantial than genetic variations in rapid adaptation of oyster to Pacific oyster mortality syndrome","year":2023,"lang":"en","type":"article","venue":"Science Advances","topic":"Marine Bivalve and Aquaculture Studies","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministère des Ressources naturelles et des Forêts","funders":"Agence Nationale de la Recherche","keywords":"Epigenetics; Biology; Epigenome; Genetics; Adaptation (eye); DNA methylation; Pacific oyster; Oyster; Genetic variation; Genome; Evolutionary biology; Gene; Quantitative trait locus; Ecology; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005027461,0.0001381499,0.0001920861,0.0001868526,0.0002662388,0.00003843174,0.0003680779,0.00003253428,0.0001830284],"category_scores_gemma":[0.0001400167,0.0001161458,0.00004915693,0.002776624,0.0004344147,0.0005226002,0.0002105527,0.00006788653,0.000175124],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007432411,"about_ca_system_score_gemma":0.0000326498,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003563425,"about_ca_topic_score_gemma":0.002498492,"domain_scores_codex":[0.9980609,0.00004848051,0.0003426158,0.000478121,0.0007013419,0.0003684887],"domain_scores_gemma":[0.9993729,0.00005105933,0.0001428939,0.0003007209,0.00004238545,0.00009006051],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000071226,0.00007130568,0.9419703,0.0000272519,0.00000927523,0.00001336029,0.005549309,0.03448384,0.01174724,0.0001366783,0.00005535688,0.005928919],"study_design_scores_gemma":[0.000116602,0.00005974434,0.9934332,0.00002652103,0.00001140205,0.000002516515,0.002416815,0.002072388,0.0005166528,0.0006819467,0.0005122258,0.0001499871],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943158,0.00008782514,0.002986581,0.0005189282,0.0002536061,0.0003821306,0.00002976306,0.00003959859,0.001385794],"genre_scores_gemma":[0.9973909,0.0000447775,0.002127717,0.00003546665,0.00002075248,0.00006449119,0.000006174695,0.000006863715,0.0003028123],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05146286,"threshold_uncertainty_score":0.4736287,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02395515168496899,"score_gpt":0.2862891693262968,"score_spread":0.2623340176413278,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}