{"id":"W4386591208","doi":"10.1093/gbe/evad164","title":"Evolution of an Alternative Genetic Code in the <i>Providencia</i> Symbiont of the Hematophagous Leech <i>Haementeria acuecueyetzin</i>","year":2023,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Leech Biology and Applications","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Universidad Nacional Autónoma de México; European Commission","keywords":"Biology; Genome; Evolutionary biology; Lineage (genetic); Providencia; Leech; Synteny; Buchnera; Symbiotic bacteria; Genetics; Zoology; Symbiosis; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009140522,0.0002004803,0.0001582686,0.0003736714,0.0002743009,0.0004012327,0.0001836873,0.0003748547,0.0005291654],"category_scores_gemma":[0.0002081693,0.000158532,0.0002319278,0.0002641474,0.0002349283,0.0002025585,0.0004211449,0.0003279993,0.0002300309],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002867064,"about_ca_system_score_gemma":0.0002133838,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001041338,"about_ca_topic_score_gemma":0.001717699,"domain_scores_codex":[0.9999245,0.000008600659,0.000005948129,0.00003018262,0.00001346795,0.00001721296],"domain_scores_gemma":[0.9998179,0.00002964732,0.00007244269,0.00002739973,0.00002190159,0.00003069746],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001047666,0.0000105262,0.004739834,0.0000433674,0.00001035407,0.0001961702,0.00009490758,0.00005904951,0.9923265,0.0001080908,0.00001777915,0.002288582],"study_design_scores_gemma":[0.00004552748,0.0007276226,0.6784819,0.00007447856,0.0001565662,0.00281477,0.0007643301,0.002433337,0.3038526,0.0002781184,0.01031469,0.00005603075],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984379,0.0002237505,0.0006266249,0.00002685732,0.000005439499,0.000008521552,0.0001789348,0.00002963776,0.0004622263],"genre_scores_gemma":[0.9962877,0.0001684338,0.001924018,0.00006336582,0.000006471189,0.00001846444,0.0007144564,0.00002393437,0.0007931118],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001041338,"threshold_uncertainty_score":0.002080262,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01646984700104057,"score_gpt":0.2877187094072188,"score_spread":0.2712488624061783,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}