{"id":"W4386624729","doi":"10.1093/humupd/dmad025","title":"Transcriptomic integrity of human oocytes used in ARTs: technical and intrinsic factor effects","year":2023,"lang":"en","type":"review","venue":"Human Reproduction Update","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Transcriptome; Oocyte; Polycystic ovary; Infertility; Context (archaeology); Biology; Reproductive technology; Fertility preservation; Bioinformatics; Medicine; Fertility; Pregnancy; Embryo; Genetics; Endocrinology; Insulin resistance; Population; Obesity; Environmental health; Cryopreservation; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00130419,0.0004829204,0.002570479,0.000620169,0.0001082321,0.00001333765,0.000176024,0.0006427864,0.00006395056],"category_scores_gemma":[0.0007110496,0.0003809887,0.0003731393,0.0005460008,0.0006189787,0.00008298332,0.0001016513,0.001538057,0.00004790653],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001898454,"about_ca_system_score_gemma":0.0001149352,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005434242,"about_ca_topic_score_gemma":0.00005565422,"domain_scores_codex":[0.9961317,0.0004225296,0.0012025,0.001728649,0.000203289,0.0003113304],"domain_scores_gemma":[0.997755,0.00009295151,0.000427992,0.001507132,0.0001172866,0.00009965001],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00106961,0.00157464,0.006590845,0.1396205,0.001112311,0.0001488444,0.000535198,7.001489e-8,0.02164336,0.001899503,0.001054493,0.8247506],"study_design_scores_gemma":[0.004067409,0.002332938,0.3213217,0.03799899,0.003646645,0.000738217,0.00008018831,5.960675e-7,0.01066586,0.004055575,0.6131595,0.001932389],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.167162,0.8294692,0.000003982153,0.0001206645,0.0004851658,0.002402677,0.00002893731,0.0002464077,0.00008096115],"genre_scores_gemma":[0.05391663,0.9442127,0.00005069342,0.00001526034,0.000631787,0.0002172492,0.0003583078,0.00008299702,0.0005143736],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8228182,"threshold_uncertainty_score":0.9998642,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1512236000855126,"score_gpt":0.3988271270911517,"score_spread":0.2476035270056391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}