{"id":"W4386648160","doi":"10.3168/jds.2023-23407","title":"Within-herd transmission of Mycoplasma bovis infections after initial detection in dairy cows","year":2023,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Herd; Veterinary medicine; Outbreak; Animal science; Transmission (telecommunications); Biology; Mycoplasma hyopneumoniae; Dairy cattle; Medicine; Virology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002280483,0.0002698,0.0004388734,0.0004903289,0.0002680769,0.0007209806,0.0005449171,0.0004913283,0.0002663478],"category_scores_gemma":[0.003511864,0.0003563217,0.0004780138,0.0003333897,0.0002509182,0.00059519,0.0004299536,0.0002726208,0.00009404818],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007675315,"about_ca_system_score_gemma":0.0004367114,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01457841,"about_ca_topic_score_gemma":0.0128454,"domain_scores_codex":[0.999257,0.0002968815,0.00004547396,0.0002121561,0.00006894355,0.0001193963],"domain_scores_gemma":[0.9985331,0.0007491605,0.0004226095,0.0001308338,0.00008280845,0.0000814268],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000185017,0.00005946408,0.9865893,0.00001779323,0.0001270591,0.00008347687,0.00015627,0.006729866,0.001893494,0.00004936303,0.00002945196,0.004079475],"study_design_scores_gemma":[0.00001285692,0.0005720406,0.9409001,0.00001869295,0.0001367861,0.0002067463,0.0003118756,0.05644752,0.001004563,0.0001997219,0.0001728007,0.00001623092],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992422,0.00008341005,0.0005798165,0.00000485639,5.343321e-7,0.000002847721,0.00004693538,0.00000385383,0.00003561072],"genre_scores_gemma":[0.9990601,0.00008877183,0.0005619841,0.000007775289,0.000001428612,0.000005608204,0.0001913026,0.000001341727,0.00008166728],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01457841,"threshold_uncertainty_score":0.02898711,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.019205018725984,"score_gpt":0.3065823678580878,"score_spread":0.2873773491321038,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}