{"id":"W4386703665","doi":"10.1002/gcc.23196","title":"Complementary value of molecular analysis to expert review in refining classification of uncommon soft tissue tumors","year":2023,"lang":"en","type":"article","venue":"Genes Chromosomes and Cancer","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Sinai Hospital","funders":"National Cancer Institute","keywords":"Fluorescence in situ hybridization; Sarcoma; Molecular pathology; Soft tissue; Molecular diagnostics; Pathology; Molecular genetics; Computational biology; Synovial sarcoma; Fish <Actinopterygii>; Biology; Medicine; Bioinformatics; Chromosome; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001060053,0.0000890148,0.0004456779,0.0001765068,0.00001491717,0.000002190471,0.00004216716,0.00001966936,0.0001391575],"category_scores_gemma":[0.000007883436,0.00007310641,0.00007294484,0.0008877637,0.00002032208,0.00001608792,0.00003467665,0.00002385795,0.000002039694],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005316835,"about_ca_system_score_gemma":0.00003323929,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001465798,"about_ca_topic_score_gemma":0.0002645572,"domain_scores_codex":[0.9992008,0.00002905683,0.0003020845,0.0001866316,0.0001670558,0.000114343],"domain_scores_gemma":[0.9995921,0.00003063647,0.0000856855,0.0001981986,0.00003999244,0.00005334841],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003080871,0.0001655263,0.493826,0.0008512702,0.0006529821,0.00004845687,0.0004636713,0.0002905884,0.0706908,0.0001549024,0.001075947,0.431749],"study_design_scores_gemma":[0.0009091806,0.0002319512,0.9027833,0.002395974,0.0009550607,0.00000373374,0.0004438047,0.0003370072,0.07843923,0.00002146411,0.01333199,0.0001472423],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8444836,0.1526501,0.00001111832,0.002548507,0.0000234931,0.00018898,0.00003376321,0.000009068927,0.00005140798],"genre_scores_gemma":[0.9558257,0.04288632,0.0003282967,0.0006123713,0.00001963648,0.0001775992,0.0001154296,0.000009616306,0.00002497386],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4316018,"threshold_uncertainty_score":0.2981193,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04227395785342431,"score_gpt":0.3692905970992274,"score_spread":0.3270166392458031,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}