{"id":"W4386703933","doi":"10.1128/msystems.00197-23","title":"Identification of hidden N4-like viruses and their interactions with hosts","year":2023,"lang":"en","type":"article","venue":"mSystems","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Fundamental Research Funds for the Central Universities; National Key Research and Development Program of China; Marine S&T Fund of Shandong Province; Central University Basic Research Fund of China; National Natural Science Foundation of China; Shandong University","keywords":"Biology; Lineage (genetic); Evolutionary biology; Genome; Host (biology); Viral replication; Viral evolution; Identification (biology); Mechanism (biology); Reprogramming; Function (biology); Computational biology; Genetics; Virology; Virus; Gene; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002833398,0.0002817572,0.0003406374,0.0005750434,0.0003598946,0.0005382413,0.0001981513,0.0003516021,0.0007465176],"category_scores_gemma":[0.0004654553,0.0001439125,0.0003056373,0.0005312412,0.0001759703,0.0005805004,0.0005588756,0.0002853528,0.0003031615],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002745298,"about_ca_system_score_gemma":0.0002120923,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008862274,"about_ca_topic_score_gemma":0.001024058,"domain_scores_codex":[0.9997521,0.00003831927,0.00001607327,0.00007446371,0.00005888717,0.00006016429],"domain_scores_gemma":[0.9997501,0.00005065287,0.00008765898,0.00002505467,0.00004347263,0.00004303542],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003716181,0.00007265649,0.1574802,0.0002058584,0.00006867567,0.0002758523,0.0002209023,0.0004742566,0.8313959,0.0002773588,0.0001485602,0.009008099],"study_design_scores_gemma":[0.00002775132,0.0005894022,0.7406101,0.00008990417,0.0001873338,0.001964535,0.002123868,0.01979468,0.2186539,0.00134357,0.01455197,0.00006297565],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971993,0.0005599221,0.001073553,0.00001582817,0.000004912539,0.00001237377,0.0005494789,0.00001791888,0.0005668295],"genre_scores_gemma":[0.9940111,0.0003439537,0.002946341,0.00002797295,0.000006193608,0.0000239263,0.002076596,0.0000106594,0.0005532618],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008862274,"threshold_uncertainty_score":0.002497375,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01456027684299463,"score_gpt":0.2456822282334887,"score_spread":0.2311219513904941,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}