{"id":"W4386835210","doi":"10.20944/preprints202309.0977.v1","title":"Mitogenome Variations in a Global Population of Aspergillus fumigatus","year":2023,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Phylogenetic tree; Evolutionary biology; Mitochondrial DNA; Aspergillus fumigatus; Population; Genetics; Phylogenetics; Genome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003425319,0.000169569,0.0002240444,0.000896237,0.0002451043,0.0002810575,0.0001363463,0.0001900123,0.0007136294],"category_scores_gemma":[0.0009217576,0.00007447195,0.0002241221,0.001188993,0.0002464487,0.0001606709,0.0002809131,0.0002065672,0.0001229983],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001265552,"about_ca_system_score_gemma":0.00009314327,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002171839,"about_ca_topic_score_gemma":0.004014861,"domain_scores_codex":[0.9997731,0.00004268843,0.00001760723,0.0001093694,0.00003199723,0.00002529995],"domain_scores_gemma":[0.9995696,0.00009862635,0.0001614177,0.00005714341,0.00007080394,0.00004234599],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002765075,0.00003472592,0.9116401,0.00006484699,0.0002584314,0.0002963739,0.0009091715,0.0005255707,0.07143115,0.0001722679,0.0002393501,0.01415146],"study_design_scores_gemma":[0.000003795861,0.00004250318,0.9979677,0.000005762639,0.00003799032,0.0002531873,0.0002741388,0.0002256353,0.0005902291,0.00006901922,0.0005255334,0.000004522647],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988849,0.0001827348,0.0003307714,0.00001516065,0.000002194362,0.00000364432,0.0003652935,0.000004508708,0.0002108529],"genre_scores_gemma":[0.9984505,0.00009931019,0.0004218435,0.00001966918,0.000004293395,0.000006765759,0.0009391414,0.000003431307,0.00005512915],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002171839,"threshold_uncertainty_score":0.004318357,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1555992778197598,"score_gpt":0.3933010719760498,"score_spread":0.23770179415629,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}