{"id":"W4386839664","doi":"10.1186/s12864-023-09669-8","title":"Integrative analysis of genome and transcriptome reveal the genetic basis of high temperature tolerance in pleurotus giganteus (Berk. Karun &amp; Hyde)","year":2023,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Education and Child Care","funders":"Central Public-interest Scientific Institution Basal Research Fund for Chinese Academy of Tropical Agricultural Sciences; National Natural Science Foundation of China","keywords":"Biology; Pleurotus; Gene; Transcriptome; Genome; Genetics; Heat shock protein; Phylogenetic tree; Genome size; Mushroom; Botany; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009626558,0.0003889711,0.0002424324,0.0004003137,0.0002372481,0.0002452888,0.0001975793,0.0002044983,0.0005899806],"category_scores_gemma":[0.00007682449,0.0001226802,0.0004685915,0.0003903009,0.00013996,0.0001666205,0.000387147,0.0003076325,0.0002075583],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001888099,"about_ca_system_score_gemma":0.0001199009,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008210752,"about_ca_topic_score_gemma":0.001273046,"domain_scores_codex":[0.9999295,0.000005489702,0.000004771948,0.00003313974,0.00001531495,0.00001182326],"domain_scores_gemma":[0.9999474,0.000007565174,0.00001870897,0.000006763055,0.000006749628,0.00001275745],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000184145,0.00002245563,0.00411061,0.0001059224,0.00002676279,0.0002343054,0.0001228166,0.0001789778,0.9912058,0.00007049779,0.00008548548,0.003652379],"study_design_scores_gemma":[0.00004336187,0.0004038979,0.8535762,0.00005099395,0.0002705724,0.001837245,0.0007265598,0.004483336,0.1276966,0.0003869415,0.01049076,0.00003353252],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924724,0.001107193,0.002123385,0.00006552137,0.00001280092,0.00001613002,0.002952728,0.0000786369,0.001171279],"genre_scores_gemma":[0.9871486,0.0005218579,0.002730363,0.00007881785,0.00000654149,0.00003060864,0.007746107,0.00003923666,0.00169787],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008210752,"threshold_uncertainty_score":0.001973629,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01863219554052823,"score_gpt":0.2616350742994361,"score_spread":0.2430028787589079,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}