{"id":"W4386839664","doi":"10.1186/s12864-023-09669-8","title":"Integrative analysis of genome and transcriptome reveal the genetic basis of high temperature tolerance in pleurotus giganteus (Berk. Karun &amp; Hyde)","year":2023,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Education and Child Care","funders":"Central Public-interest Scientific Institution Basal Research Fund for Chinese Academy of Tropical Agricultural Sciences; National Natural Science Foundation of China","keywords":"Biology; Pleurotus; Gene; Transcriptome; Genome; Genetics; Heat shock protein; Phylogenetic tree; Genome size; Mushroom; Botany; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000187207,0.0001227537,0.000441961,0.0002301496,0.00004541731,0.000004228367,0.000130249,0.0001129541,0.00002168301],"category_scores_gemma":[0.00005310116,0.00008383289,0.0001157084,0.001224461,0.0001831826,0.00001393798,0.00002764339,0.0001955511,0.000006653912],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002741747,"about_ca_system_score_gemma":0.00007058682,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001570757,"about_ca_topic_score_gemma":0.001001269,"domain_scores_codex":[0.9991102,0.00006846581,0.000352551,0.0002380077,0.00007985783,0.0001509459],"domain_scores_gemma":[0.9992723,0.0001733429,0.00009878615,0.000340662,0.00007146786,0.0000434002],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002121367,0.00007063655,0.09853192,0.00009050807,0.0003682938,0.000003138394,0.003606548,0.002297039,0.8941284,0.0003413932,0.0001022472,0.0002476877],"study_design_scores_gemma":[0.0005155085,0.00007840703,0.9854385,0.0000237334,0.0005205396,0.0000060958,0.0004990745,0.0004300844,0.01176922,0.0001754333,0.0004550707,0.00008833626],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976816,0.0009365565,0.00007615548,0.0005642567,0.00003100203,0.0003635835,0.0002673741,0.00001370021,0.00006577308],"genre_scores_gemma":[0.9970933,0.0005798282,0.001463155,0.0001524451,0.00003204338,0.00003981302,0.0001325502,0.00001089288,0.0004960358],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8869066,"threshold_uncertainty_score":0.3418606,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01863219554052823,"score_gpt":0.2616350742994361,"score_spread":0.2430028787589079,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}