{"id":"W4386866081","doi":"10.1053/j.gastro.2023.09.019","title":"Pathobionts in Inflammatory Bowel Disease: Origins, Underlying Mechanisms, and Implications for Clinical Care","year":2023,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":206,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Canada; Michael Smith Health Research BC","keywords":"Inflammatory bowel disease; Medicine; Intensive care medicine; Disease; Inflammatory Bowel Diseases; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003844619,0.0004107905,0.0007018993,0.0001696606,0.00009242173,0.00002926374,0.0003445278,0.000471023,0.000002524747],"category_scores_gemma":[0.0001672932,0.0004151488,0.0004329444,0.00004791746,0.0001316403,0.000004910611,0.0003029042,0.0002418692,0.00001690612],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001106206,"about_ca_system_score_gemma":0.0004483672,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001844464,"about_ca_topic_score_gemma":0.0001877193,"domain_scores_codex":[0.9972503,0.0003940788,0.0008602302,0.0008887472,0.00006741551,0.0005392354],"domain_scores_gemma":[0.9986074,0.0000553705,0.0003200275,0.0006511898,0.00008103385,0.0002849659],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002962116,0.0005111432,0.403843,0.09958529,0.002157723,0.0008934913,0.0001443416,0.00004747729,0.0001055421,0.008984522,0.009638578,0.4711268],"study_design_scores_gemma":[0.002360019,0.0004645356,0.1837789,0.002210305,0.0009222247,0.00004711836,0.00006627272,0.00001370486,2.098778e-7,0.000688828,0.8088104,0.0006374558],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01318047,0.9802566,0.001466946,0.00007068668,0.00064075,0.002652675,0.00165604,0.00006724009,0.000008623365],"genre_scores_gemma":[0.0008571721,0.9939603,0.0004546484,0.0002022828,0.0002498691,0.001425321,0.002681705,0.0001194452,0.00004923194],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.7991719,"threshold_uncertainty_score":0.99983,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06693913028549418,"score_gpt":0.3851329402501552,"score_spread":0.318193809964661,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}