{"id":"W4386886411","doi":"10.1136/gutjnl-2023-basl.48","title":"P32 Statistical colocalization identifies twenty-four novel risk loci associated with disease risk of primary biliary cholangitis","year":2023,"lang":"en","type":"article","venue":"Poster presentations","topic":"Liver Diseases and Immunity","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"","keywords":"Genome-wide association study; Biology; Quantitative trait locus; Locus (genetics); Genetics; Expression quantitative trait loci; Candidate gene; In silico; Genetic association; Allele; Gene; Computational biology; Genotype; Single-nucleotide polymorphism","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001896962,0.0001299284,0.0002268312,0.0001679194,0.0001956506,0.00004469527,0.00008844039,0.0000457303,0.0001976891],"category_scores_gemma":[0.0009311005,0.0001100393,0.00008600822,0.0005343993,0.0001690543,0.000236581,0.00009257822,0.0001652102,0.00005230428],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005629824,"about_ca_system_score_gemma":0.0001770692,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006724481,"about_ca_topic_score_gemma":0.000057521,"domain_scores_codex":[0.9986287,0.0002077702,0.0002961425,0.000226006,0.0004291249,0.000212292],"domain_scores_gemma":[0.9984836,0.000475935,0.000198983,0.0003229314,0.0003024726,0.0002160895],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003443517,0.0006028437,0.9886591,0.000153081,0.000460681,0.00004060182,0.0005976082,0.0002296035,0.0003899802,0.00007304679,0.007996481,0.0004526262],"study_design_scores_gemma":[0.002003813,0.0001429133,0.9929281,0.00008995237,0.001335829,0.00000300202,0.0003740422,0.002463392,0.0001866171,0.000293224,0.0000614572,0.000117635],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985688,0.00007470184,0.006755421,0.0002997257,0.00009901961,0.0006738821,0.005738534,0.0001353139,0.0005353857],"genre_scores_gemma":[0.991914,0.000173028,0.0001745676,0.0001168827,0.00004179493,0.00005832403,0.006177736,0.00002897566,0.00131463],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007935023,"threshold_uncertainty_score":0.4487275,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02935071354379989,"score_gpt":0.2854114338007607,"score_spread":0.2560607202569608,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}