{"id":"W4386944842","doi":"10.3201/eid2910.230548","title":"Influenza A(H5N1) Virus Infections in 2 Free-Ranging Black Bears (<i>Ursus americanus</i>), Quebec, Canada","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; University of Saskatchewan; Canadian Food Inspection Agency","funders":"Parks Canada; Oxford Nanopore Technologies","keywords":"Influenza A virus subtype H5N1; Ursus; Virology; Biology; Clade; Virus; Influenza A virus; Zoology; Gene; Phylogenetics; Genetics; Medicine; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002385865,0.0004110927,0.000611272,0.001055791,0.0004684343,0.00007346473,0.0002167586,0.0000912916,0.0003153337],"category_scores_gemma":[0.002301711,0.0004320351,0.0002141739,0.003179311,0.0004025756,0.000293931,0.000332248,0.000580194,0.000258101],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001317775,"about_ca_system_score_gemma":0.001597084,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8659855,"about_ca_topic_score_gemma":0.902649,"domain_scores_codex":[0.9965972,0.0001612199,0.0005689259,0.0005694812,0.00086878,0.001234388],"domain_scores_gemma":[0.9980049,0.0004293978,0.0001326533,0.000711814,0.000252507,0.0004687395],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001498665,0.0003470921,0.7711668,0.0003829801,0.0004549947,0.0007634372,0.0008754489,0.01097584,0.0006168868,0.0001340123,0.2084876,0.005645053],"study_design_scores_gemma":[0.005244172,0.0002476719,0.7038048,0.0004647884,0.0002845918,0.00003606365,0.001559292,0.001530252,0.000358097,0.0003326869,0.2852339,0.0009036504],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9876125,0.002627614,0.00002553356,0.002539256,0.000863575,0.0007670558,0.0002099694,0.001002455,0.004352041],"genre_scores_gemma":[0.9911619,0.001409635,0.00001689633,0.003539565,0.0005517828,0.000373452,0.00008526202,0.0001300798,0.002731367],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07674637,"threshold_uncertainty_score":0.9998131,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0254684250237529,"score_gpt":0.325782794719961,"score_spread":0.3003143696962081,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}