{"id":"W4386944873","doi":"10.1099/ijsem.0.006022","title":"Clavibacter lycopersici sp. nov.: a peach-colored actinobacterium isolated from symptomless tomato plant","year":2023,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"College of Agriculture Natural Resources, University of Tehran; Iran National Science Foundation","keywords":"Clavibacter michiganensis; Biology; Phyllosphere; Microbiology; Housekeeping gene; Botany; 16S ribosomal RNA; Pathogen; Phylogenetic tree; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003374873,0.0001911581,0.0005340335,0.00007899574,0.0001150082,0.00005385942,0.0004572903,0.0001527976,0.0001591149],"category_scores_gemma":[0.00009414643,0.00008176258,0.0001506956,0.000146605,0.00009419248,0.0001920479,0.0001827677,0.0001507564,0.0001247497],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009054039,"about_ca_system_score_gemma":0.00002398165,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004466992,"about_ca_topic_score_gemma":0.00004126175,"domain_scores_codex":[0.9983799,0.0002148882,0.0007775476,0.0002182933,0.0001621855,0.0002471881],"domain_scores_gemma":[0.998472,0.0005151267,0.0005886848,0.00005057623,0.0002939804,0.00007963079],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000275079,0.00006237601,0.007230106,0.0001468615,0.000563125,0.0001584417,0.0003029265,0.000003017994,0.9867806,0.00002705556,0.004350405,0.00009993483],"study_design_scores_gemma":[0.002757846,0.001097766,0.9358302,0.009426173,0.0005243625,0.02374173,0.00566764,0.0009113618,0.003344136,0.000509405,0.01498387,0.001205462],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945242,0.0005979569,0.000007591305,0.001870778,0.001440127,0.0001976855,0.00127935,0.00004432358,0.00003801484],"genre_scores_gemma":[0.9981982,0.0002733851,0.00007921027,0.000213915,0.0004661456,0.00001050207,0.0006479635,0.000002103843,0.0001086463],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9834365,"threshold_uncertainty_score":0.3334182,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01835164853414748,"score_gpt":0.215524119076405,"score_spread":0.1971724705422576,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}