{"id":"W4386998232","doi":"10.1007/s00203-023-03671-0","title":"Characterization and description of Gabonibacter chumensis sp. nov., isolated from feces of a patient with non-small cell lung cancer treated with immunotherapy","year":2023,"lang":"en","type":"article","venue":"Archives of Microbiology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique; McGill University; McGill University Health Centre; Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Institut Du Cancer de Montréal; Directorate for Biological Sciences; Terry Fox Research Institute","keywords":"Biology; 16S ribosomal RNA; Phylogenetic tree; Microbiology; Strain (injury); Ribosomal RNA; genomic DNA; Gene; Phylogenetics; Bacteria; Sequence analysis; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001060569,0.0008855698,0.0006626036,0.001076162,0.0007263207,0.0006400155,0.0002629356,0.0006968606,0.0004780495],"category_scores_gemma":[0.0004211504,0.0002919189,0.0004958877,0.00104949,0.000268093,0.0004817331,0.0005413876,0.0003297444,0.0002836677],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002131449,"about_ca_system_score_gemma":0.0004504405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009364366,"about_ca_topic_score_gemma":0.005723071,"domain_scores_codex":[0.9998487,0.00001366187,0.00003031085,0.00004370669,0.00003093778,0.00003261952],"domain_scores_gemma":[0.9997705,0.00003023841,0.00004543368,0.00001616491,0.00006574348,0.00007198424],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006527019,0.0003261432,0.252991,0.000997128,0.00009959594,0.07597352,0.003256697,0.0006459408,0.6396008,0.0002047968,0.0009824949,0.02426924],"study_design_scores_gemma":[0.00008822231,0.001533598,0.7670336,0.0002459427,0.0005910236,0.1086758,0.01076983,0.00462167,0.09275386,0.0002274195,0.01333503,0.000124102],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996541,0.001295568,0.0007520544,0.0001480162,0.00006090512,0.00006913785,0.0006919297,0.00001628349,0.0004250985],"genre_scores_gemma":[0.995061,0.0009298948,0.001975571,0.0001421899,0.00005967926,0.00002877052,0.001270757,0.00001268108,0.0005195311],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009364366,"threshold_uncertainty_score":0.01861972,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004491040939744848,"score_gpt":0.1819103353838139,"score_spread":0.177419294444069,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}