{"id":"W4387052604","doi":"10.1016/j.ebiom.2023.104804","title":"Distinct HLA associations with autoantibody-defined subgroups in idiopathic inflammatory myopathies","year":2023,"lang":"en","type":"article","venue":"EBioMedicine","topic":"Inflammatory Myopathies and Dermatomyositis","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Jewish General Hospital","funders":"European Social Fund; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Environmental Health Sciences; Vetenskapsrådet; Foundation for Research in Rheumatology; Department of Health and Social Care; Medical Research Council; Versus Arthritis; Stiftelsen Professor Nanna Svartz Fond; Reumatikerförbundet; Stiftelsen Börje Dahlins Fond; Ulla och Gustaf af Ugglas Stiftelse; European Commission; Stiftelsen Konung Gustaf V:s 80-årsfond; Norges Forskningsråd; Ministerstvo Školství, Mládeže a Tělovýchovy; European Science Foundation; Stockholms Läns Landsting; National Institute for Health and Care Research; Arthritis Research UK; Fonds de Recherche du Québec - Santé; Manchester Biomedical Research Centre; Torsten Söderbergs Stiftelse; Sixth Framework Programme; Hjärt-Lungfonden; Åke Wiberg Stiftelse","keywords":"Autoantibody; Human leukocyte antigen; Medicine; Immunology; Antibody; Antigen","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004005154,0.0002938619,0.0003694392,0.0008946374,0.0003290771,0.0003806389,0.0002632248,0.0003315734,0.001923641],"category_scores_gemma":[0.001724155,0.000114691,0.0003213045,0.0009748464,0.0003459514,0.0001961314,0.0005141099,0.0003577479,0.000269755],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001519667,"about_ca_system_score_gemma":0.0001704409,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005155327,"about_ca_topic_score_gemma":0.0004950829,"domain_scores_codex":[0.9994635,0.0001346619,0.00006964508,0.0001508619,0.00008470645,0.00009654978],"domain_scores_gemma":[0.9980353,0.0005263568,0.0008549833,0.0001480491,0.0001530718,0.0002823286],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004172873,0.0000342541,0.9929276,0.00001398629,0.00006596395,0.0001321752,0.0001178623,0.0001116073,0.003415375,0.00003688573,0.00005722887,0.002669775],"study_design_scores_gemma":[0.00001377765,0.0001124246,0.9975151,0.000006798909,0.00003668935,0.001008771,0.0002017943,0.0004438675,0.000345551,0.0001451268,0.0001657403,0.000004420942],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999586,0.00009695028,0.0001336507,0.000008147958,0.000001184487,0.000003766268,0.00005149138,0.000002474829,0.0001162618],"genre_scores_gemma":[0.9996989,0.00001772098,0.0001204646,0.000005258933,0.000002844339,0.00000393791,0.0001095317,0.000002426916,0.00003901656],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001923641,"threshold_uncertainty_score":0.006435275,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01142906590811612,"score_gpt":0.2553302414326825,"score_spread":0.2439011755245663,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}