{"id":"W4387057440","doi":"10.22541/au.169570833.31408402/v1","title":"The Omicron XBB.1 Variant and its Descendants: Genomic Mutations, Rapid Dissemination and Notable Characteristics","year":2023,"lang":"en","type":"preprint","venue":"","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Regione Calabria; European Commission","keywords":"Spike (software development); Biology; Glycoprotein; Genome; Genetics; Sequence (biology); Transmissibility (structural dynamics); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virus; Computational biology; Mutation; Viral replication; Replication (statistics); Pandemic; Coronavirus disease 2019 (COVID-19); Gene; Virology; Computer science; Medicine","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007805898,0.0001805831,0.0002019618,0.0001962126,0.000196485,0.0003920554,0.0001112006,0.0002553188,0.001515121],"category_scores_gemma":[0.0002231624,0.0000768653,0.0001454455,0.0003751722,0.000124216,0.0001295073,0.0001341555,0.000341546,0.0004819978],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001498273,"about_ca_system_score_gemma":0.0001002057,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001602227,"about_ca_topic_score_gemma":0.001141184,"domain_scores_codex":[0.9999406,0.000007348231,0.000004369672,0.00002015543,0.00001305427,0.00001431067],"domain_scores_gemma":[0.999928,0.000009466778,0.00002626896,0.000008988996,0.000008357263,0.00001891734],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001257481,0.000162491,0.09059015,0.0001410885,0.00006950898,0.0029756,0.0004718944,0.0009968497,0.8639651,0.002800748,0.001730154,0.03483901],"study_design_scores_gemma":[0.0001028309,0.001146628,0.6902024,0.00006611657,0.00009364923,0.02347313,0.0007780587,0.009835659,0.2226569,0.00283788,0.04874032,0.00006645946],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951255,0.001143283,0.0009796781,0.0001692336,0.00002813945,0.000008871409,0.0006890853,0.00001818092,0.001838174],"genre_scores_gemma":[0.9916705,0.0005402146,0.002151949,0.0001061197,0.00002674594,0.000009651852,0.002199556,0.0000311771,0.003264047],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001602227,"threshold_uncertainty_score":0.0050686,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04421603634375994,"score_gpt":0.3481784915737889,"score_spread":0.303962455230029,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}