{"id":"W4387122751","doi":"10.1101/2023.09.27.559827","title":"Human vaginal microbiota colonization is regulated by female sex hormones in a mouse model","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Bacterial vaginosis; Lactobacillus rhamnosus; Lactobacillus crispatus; Lactobacillus; Lactobacillus reuteri; Biology; Dysbiosis; Hormone; Probiotic; Microbiology; Internal medicine; Vaginal flora; Endocrinology; Vagina; Gardnerella vaginalis; Physiology; Immunology; Gut flora; Medicine; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005070002,0.0007131144,0.000534516,0.001175602,0.0002733292,0.0005804064,0.000289461,0.0007673249,0.002391039],"category_scores_gemma":[0.0002427091,0.0004612615,0.0007376612,0.0004702171,0.0004638413,0.0004011802,0.0003823294,0.001506871,0.000824501],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000325206,"about_ca_system_score_gemma":0.0003115067,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004510442,"about_ca_topic_score_gemma":0.0005695878,"domain_scores_codex":[0.999345,0.0001135074,0.0000447928,0.0001981738,0.00018049,0.000118025],"domain_scores_gemma":[0.9996766,0.0000270304,0.0001049272,0.00005131759,0.00003167096,0.0001085213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001327559,0.0004758229,0.001753114,0.000101451,0.0000224294,0.0001835609,0.00006323116,0.00006746707,0.9916403,0.00009729109,0.0002015094,0.004066137],"study_design_scores_gemma":[0.0003091536,0.01139293,0.05156969,0.0001187354,0.0002150073,0.002446211,0.0004917961,0.001978551,0.9171634,0.0004252101,0.01382485,0.0000643081],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9794965,0.006422607,0.007332836,0.0004925468,0.0001871095,0.0002025563,0.002831516,0.0002930269,0.002741283],"genre_scores_gemma":[0.976982,0.004602176,0.00496495,0.0004207087,0.00005313379,0.0005238639,0.002510604,0.0001080319,0.009834619],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002391039,"threshold_uncertainty_score":0.007998824,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02677593646578819,"score_gpt":0.268572477414782,"score_spread":0.2417965409489938,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}