{"id":"W4387138358","doi":"10.1101/2023.09.27.559745","title":"Dairy practices select for thermostable endolysins in phages","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Argonne National Laboratory; Natural Sciences and Engineering Research Council of Canada; Eli Lilly and Company; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; U.S. Department of Energy; Office of Science; National Science Foundation","keywords":"Lysin; Streptococcus thermophilus; Lytic cycle; Bacteriophage; Biology; Bacteria; Dairy industry; Thermophile; Peptidoglycan; Microbiology; Biochemistry; Food science; Genetics; Escherichia coli; Lactic acid; Gene; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006862627,0.0002256402,0.0004272354,0.0004800045,0.0003804439,0.001047947,0.0003121485,0.0003951727,0.002324276],"category_scores_gemma":[0.000985934,0.000171487,0.0002024359,0.0006444406,0.0003381888,0.0002892582,0.0007357523,0.0005281171,0.0003166316],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005392763,"about_ca_system_score_gemma":0.0005187399,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002315867,"about_ca_topic_score_gemma":0.002943827,"domain_scores_codex":[0.9990658,0.0001379093,0.00004828508,0.0003552645,0.0001929275,0.0001998094],"domain_scores_gemma":[0.9988938,0.0003134413,0.0003248701,0.00009492086,0.0001861756,0.0001868704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005006565,0.0002420864,0.1516303,0.00009408609,0.00007750922,0.000168219,0.000742266,0.0001022715,0.8347166,0.0002555964,0.0002257891,0.01124466],"study_design_scores_gemma":[0.00001844523,0.0005957599,0.8810244,0.00003799297,0.00007113785,0.0004149068,0.002640442,0.0006756268,0.1104246,0.0003014938,0.003767329,0.00002775557],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988434,0.0002117938,0.0002049687,0.00005563653,0.000004813667,0.000004629735,0.00008224398,0.00000685374,0.0005857201],"genre_scores_gemma":[0.9986626,0.00007577561,0.0003782082,0.00007399231,0.00000397554,0.00000498221,0.0001047721,0.000008272938,0.0006875141],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002324276,"threshold_uncertainty_score":0.007775486,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03051883450484185,"score_gpt":0.2652977001635218,"score_spread":0.23477886565868,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}