{"id":"W4387166623","doi":"10.1016/j.molp.2023.09.020","title":"Plant and animal positive-sense single-stranded RNA viruses encode small proteins important for viral infection in their negative-sense strand","year":2023,"lang":"en","type":"article","venue":"Molecular Plant","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":41,"is_retracted":false,"has_abstract":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Key Research and Development Program of China; Zhejiang University; Agriculture and Agri-Food Canada; Fujian Medical University; Institute of Microbiology, Chinese Academy of Sciences; University of Hong Kong; Natural Science Foundation of Fujian Province; Chinese Academy of Sciences; China Agricultural University; Beijing Academy of Agricultural and Forestry Sciences; Chinese Academy of Agricultural Sciences; National Natural Science Foundation of China; Shandong University","keywords":"Biology; Sense (electronics); RNA; ENCODE; Virology; Plant virus; RNA virus; Genetics; Virus; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000301794,0.0007383525,0.0002949861,0.0004702151,0.0003128054,0.0006747273,0.0002139551,0.0004424308,0.002619943],"category_scores_gemma":[0.0005045494,0.0002745104,0.0004057766,0.0002583855,0.0006029477,0.0004178287,0.0002382335,0.0005227627,0.001894804],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000302874,"about_ca_system_score_gemma":0.0003224885,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000408434,"about_ca_topic_score_gemma":0.001035892,"domain_scores_codex":[0.9998301,0.00002791851,0.0000109395,0.0000476549,0.00005364504,0.00002972809],"domain_scores_gemma":[0.9992179,0.0002465815,0.0001946833,0.00006331203,0.0001172072,0.0001603233],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001043308,0.00001320041,0.0003903288,0.00004276082,0.000003752328,0.00005095904,0.00003048503,0.00003146122,0.9968699,0.0006574369,0.00007822482,0.001727169],"study_design_scores_gemma":[0.00004971273,0.0009516841,0.01809955,0.00002829212,0.00004273303,0.0009255126,0.0002014601,0.0009318632,0.9566933,0.0009531146,0.02110166,0.00002109286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9536849,0.004012187,0.02504352,0.0002962725,0.0002881233,0.000170086,0.001403279,0.0003140988,0.01478748],"genre_scores_gemma":[0.9649069,0.001656297,0.01782299,0.0002525226,0.0001130338,0.0001372983,0.003574635,0.000102135,0.01143429],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002619943,"threshold_uncertainty_score":0.008764625,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05188932150218864,"score_gpt":0.2544207065451477,"score_spread":0.2025313850429591,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}