{"id":"W4387392387","doi":"10.1126/science.adj0070","title":"Mapping SARS-CoV-2 antigenic relationships and serological responses","year":2023,"lang":"en","type":"article","venue":"Science","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control","funders":"Division of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases; National Institute of Allergy and Infectious Diseases; Seqirus; National Institutes of Health; Shionogi; Deutsches Zentrum für Infektionsforschung; Gates Cambridge Trust; Daiichi Sankyo Europe; University of British Columbia; Cambridge Trust; Bundesministerium für Gesundheit; FUJIFILM Toyama Chemical; Bundesministerium für Bildung und Forschung; Pfizer; Icahn School of Medicine at Mount Sinai; Biomedical Advanced Research and Development Authority; Centers for Disease Control and Prevention; British Columbia Centre for Disease Control; Otsuka Pharmaceutical; Japan Agency for Medical Research and Development; National Center for Immunization and Respiratory Diseases; Provincial Health Services Authority; Moderna","keywords":"Serology; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Antigen; 2019-20 coronavirus outbreak; Biology; Immunology; Antibody; Medicine; Infectious disease (medical specialty); Disease; Outbreak","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001369366,0.0001325626,0.0001084839,0.0003320935,0.0001286115,0.0001769723,0.00004967293,0.0001499366,0.0007955919],"category_scores_gemma":[0.0003121021,0.00006119315,0.0001291776,0.0002317317,0.0001166496,0.0001041008,0.0001206447,0.0001846016,0.0001911772],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001141282,"about_ca_system_score_gemma":0.00005696308,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001018577,"about_ca_topic_score_gemma":0.0008363624,"domain_scores_codex":[0.9999204,0.00001908252,0.000004327858,0.00002231226,0.00001429322,0.00001962934],"domain_scores_gemma":[0.9998357,0.00004027868,0.00005265458,0.00001344253,0.00002517011,0.0000327374],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005427788,0.00007759736,0.3359428,0.0000327507,0.00004581048,0.0001927426,0.0003978811,0.0004122271,0.6522774,0.00007548529,0.0001037129,0.009898836],"study_design_scores_gemma":[0.000004035808,0.0003413648,0.9687014,0.000002821947,0.00001639321,0.0004557883,0.0002042215,0.000695721,0.02912934,0.00004799838,0.0003966334,0.000004244243],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99963,0.00002892291,0.0001266337,0.000003695265,6.853693e-7,0.000001860122,0.00004595379,0.000002190554,0.0001600835],"genre_scores_gemma":[0.9995115,0.00001974641,0.0001663795,0.000006550477,0.000001368022,0.000001942537,0.00016276,0.0000011685,0.000128653],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001018577,"threshold_uncertainty_score":0.002661586,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2068628836259143,"score_gpt":0.4151955874701452,"score_spread":0.2083327038442309,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}