{"id":"W4387661838","doi":"10.1080/19490976.2023.2267189","title":"Quorum sensing modulates bacterial virulence and colonization dynamics of the gastrointestinal pathogen <i>Citrobacter rodentium</i>","year":2023,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Alliance de recherche numérique du Canada; Mitacs","keywords":"Citrobacter rodentium; Virulence; Biology; Quorum sensing; Pathogen; Microbiology; Citrobacter; Colonization; Context (archaeology); Population; Gastrointestinal tract; Human pathogen; Escherichia coli; Bacteria; Enterobacteriaceae; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001180016,0.0001338916,0.0001269787,0.00003033216,0.0001171979,0.00004763587,0.0001013919,0.00007971736,0.000005092372],"category_scores_gemma":[0.00006012573,0.0001095495,0.00006052936,0.0001300535,0.0001309338,0.000006822359,0.0002449969,0.00005666551,0.000004057023],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001071691,"about_ca_system_score_gemma":0.00003472028,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003626939,"about_ca_topic_score_gemma":0.0001909332,"domain_scores_codex":[0.9991965,0.00005985108,0.0001974024,0.0002509926,0.00006445454,0.0002308211],"domain_scores_gemma":[0.9995389,0.00001071892,0.0001128055,0.0002208817,0.00008281348,0.00003387815],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004562366,0.000008812189,0.007409266,0.00001978069,0.000009159472,0.000001875066,0.00002793387,0.00003080745,0.9914777,0.00001855869,0.0002791941,0.0006713194],"study_design_scores_gemma":[0.0003711864,0.0001047414,0.06366092,0.0001206335,0.00002959572,0.0001843203,0.00007016145,0.001290386,0.9327137,0.00003443791,0.001215595,0.0002042507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988662,0.00003536767,0.0002155778,0.00026602,0.0003253391,0.0001215384,0.000124092,0.00001811086,0.00002775839],"genre_scores_gemma":[0.9976398,0.00005253564,0.001554553,0.00007264609,0.0001633016,6.185378e-7,0.0003114187,0.00002087873,0.0001842936],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0587639,"threshold_uncertainty_score":0.4467299,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005276094740855028,"score_gpt":0.1973850260745196,"score_spread":0.1921089313336646,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}