{"id":"W4387764456","doi":"10.1177/10406387231203970","title":"Comparison of 2 PCR assays on environmental samples cultured for <i>Mycobacterium avium</i> subsp. <i>paratuberculosis</i>","year":2023,"lang":"en","type":"article","venue":"Journal of Veterinary Diagnostic Investigation","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université de Montréal","funders":"Zoetis; Dairy Farmers of Canada; Novalait; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Pfizer","keywords":"Paratuberculosis; Incubation; Biology; Microbiology; Incubation period; Mycobacterium; Polymerase chain reaction; Bacilli; Mycobacterium avium subsp. paratuberculosis; Mycobacterium avium subspecies paratuberculosis; Molecular biology; Feces; Virology; Bacteria; Gene; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002036461,0.001125578,0.000589513,0.001197837,0.0002438284,0.0006125809,0.0005261994,0.0006891326,0.0008119422],"category_scores_gemma":[0.005162076,0.000631674,0.0005949892,0.0007367693,0.0005885011,0.0003534881,0.0004259009,0.0005526522,0.0006376927],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003158513,"about_ca_system_score_gemma":0.0002487029,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009591386,"about_ca_topic_score_gemma":0.00162643,"domain_scores_codex":[0.9952661,0.001452606,0.0004108576,0.001127658,0.001323816,0.0004189902],"domain_scores_gemma":[0.9938145,0.003445843,0.0005704772,0.000354413,0.001627653,0.0001871548],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006776942,0.0002890224,0.01907043,0.0002499869,0.00009806875,0.00007252159,0.000315919,0.000402553,0.9678769,0.0000902464,0.00008710429,0.01076953],"study_design_scores_gemma":[0.00003747299,0.002392747,0.06309308,0.00003997177,0.0002229138,0.0007809874,0.0002972756,0.003695067,0.9279477,0.00008650288,0.001375907,0.00003039895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9655693,0.001097884,0.03014468,0.00007014188,0.0001261167,0.0001689582,0.0003186823,0.0001924851,0.002311652],"genre_scores_gemma":[0.9250489,0.001485964,0.06779945,0.0002630955,0.0000946917,0.0003596552,0.00270762,0.0001001935,0.002140458],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002036461,"threshold_uncertainty_score":0.01077002,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.088074572598381,"score_gpt":0.3581025213819115,"score_spread":0.2700279487835305,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}