{"id":"W4387931183","doi":"10.1002/jmv.29187","title":"Temporal and structural patterns of hepatitis B virus integrations in hepatocellular carcinoma","year":2023,"lang":"en","type":"article","venue":"Journal of Medical Virology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; Nanjing Drum Tower Hospital; Nanjing University; Universidad del Atlántico; Compute Canada; National Natural Science Foundation of China; Florida Atlantic University; Rutgers Cancer Institute of New Jersey","keywords":"Hepatitis B virus; Carcinogenesis; Biology; Hepatocellular carcinoma; Virology; Genome; Viral evolution; Virus; Genome instability; Genetics; Cancer; Gene; DNA","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007391776,0.0001175425,0.0006295445,0.0004005332,0.00003242065,0.000004030396,0.0001270622,0.0002025542,0.0003089423],"category_scores_gemma":[0.001122299,0.00008692832,0.00009098052,0.0002283627,0.0002222008,0.00006121273,0.0001006907,0.0005689266,0.000006627744],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004750521,"about_ca_system_score_gemma":0.000205182,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00656244,"about_ca_topic_score_gemma":0.01014117,"domain_scores_codex":[0.9980677,0.0001464902,0.0007925152,0.0001236206,0.0006404946,0.0002292126],"domain_scores_gemma":[0.9990746,0.0002309894,0.0002434578,0.0001108897,0.0001164725,0.0002235402],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000877173,0.00004014793,0.9919582,0.00006475675,0.00006078595,0.002033909,0.0007111163,9.483165e-7,0.001499589,0.0001764544,0.0005629768,0.002803384],"study_design_scores_gemma":[0.001585176,0.0008041774,0.9919083,0.0001446252,0.00004984168,0.0006582854,0.0001212065,0.003149549,0.0004866923,0.0003739726,0.0006564006,0.00006183967],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.991212,0.0005666896,0.0001610065,0.007588792,0.000307114,0.0001071943,0.00001821237,0.000009769283,0.0000292148],"genre_scores_gemma":[0.9968128,0.002344097,0.000135347,0.0004616272,0.0001921571,0.000003919901,0.000008498629,0.00001226671,0.00002926823],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007127165,"threshold_uncertainty_score":0.992049,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0267680711288923,"score_gpt":0.3058136276754739,"score_spread":0.2790455565465816,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}