{"id":"W4387965572","doi":"10.1093/gbe/evad196","title":"Population Genomics of the Facultatively Sexual Liverwort <i>Marchantia polymorpha</i>","year":2023,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Bryophyte Studies and Records","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome Canada; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Asexual reproduction; Marchantia polymorpha; Sexual reproduction; Evolutionary biology; Population; Genetic diversity; Genomics; Genetics; Gene flow; Genome; Subspecies; Nucleotide diversity; Genetic variation; Gene; Ecology; Haplotype; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001051265,0.00009495609,0.0001537131,0.0004179351,0.0004032214,0.0002869118,0.0001603893,0.000139119,0.0009179678],"category_scores_gemma":[0.0002210917,0.00006886025,0.0001193158,0.0005621371,0.0002031628,0.00009539427,0.0002196499,0.0001623033,0.0001089378],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009897037,"about_ca_system_score_gemma":0.0004611396,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.08771789,"about_ca_topic_score_gemma":0.1926527,"domain_scores_codex":[0.9999423,0.000005742827,0.000003401157,0.00002459585,0.00001153022,0.00001234336],"domain_scores_gemma":[0.9998503,0.00002032786,0.00005424531,0.00001330802,0.00003241815,0.0000294097],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002723438,0.00003280983,0.3017442,0.00007289718,0.00004580399,0.0001461068,0.001985638,0.0004211243,0.6787868,0.0003310186,0.000187104,0.0159741],"study_design_scores_gemma":[0.000002401657,0.00003566451,0.9967482,0.000002989487,0.000007548259,0.00008466013,0.0003411081,0.0001926798,0.001882553,0.00004308058,0.000656014,0.0000030876],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990373,0.00003669837,0.0001676986,0.00001327238,3.670435e-7,0.000002856604,0.0002991487,0.000006443551,0.0004362813],"genre_scores_gemma":[0.9985573,0.0000407796,0.0003267505,0.0000146819,6.688024e-7,0.00000467998,0.0006675328,0.00000393827,0.0003836185],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08771789,"threshold_uncertainty_score":0.1744146,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01615156894628012,"score_gpt":0.2211582850104666,"score_spread":0.2050067160641865,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}