{"id":"W4387999719","doi":"10.1093/jas/skad341.022","title":"98 Characterization of Factors Affecting the Fecal Microbiome in Young Canadian Pigs","year":2023,"lang":"en","type":"article","venue":"Journal of Animal Science","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Guelph; University of Saskatchewan","funders":"","keywords":"Microbiome; Weaning; UniFrac; Feces; Biology; Barn; Animal science; Veterinary medicine; 16S ribosomal RNA; Medicine; Microbiology; Geography; Bioinformatics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003580925,0.0003141006,0.0004134286,0.001160416,0.001435542,0.001056149,0.000287056,0.0002947252,0.001387583],"category_scores_gemma":[0.0006232639,0.0002611789,0.0002934176,0.001446448,0.0004916528,0.0002079745,0.0003639714,0.0002884048,0.0003551778],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003962146,"about_ca_system_score_gemma":0.004692643,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7373697,"about_ca_topic_score_gemma":0.8900356,"domain_scores_codex":[0.9996451,0.00001443469,0.00001210613,0.00009680542,0.0001155134,0.000116017],"domain_scores_gemma":[0.9995407,0.00004166808,0.0001240084,0.00001717054,0.0001880161,0.00008843892],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005307001,0.00004433391,0.8511086,0.0001769452,0.00008234606,0.0004817755,0.001768949,0.0003041965,0.1298459,0.00009445813,0.0003896014,0.01517222],"study_design_scores_gemma":[9.048753e-7,0.00003186357,0.9982378,0.000009710909,0.000009923342,0.00004647361,0.0004531109,0.00009872884,0.0006868378,0.000007175907,0.0004129196,0.00000446235],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965927,0.0002588191,0.0003567805,0.0000271361,0.000003872132,0.00002211268,0.001802322,0.000008630824,0.0009274803],"genre_scores_gemma":[0.9927416,0.0005237255,0.001435846,0.00008019394,0.000004934769,0.00003382545,0.002873021,0.000020974,0.002285826],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2626303,"threshold_uncertainty_score":0.5283539,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0322432846924397,"score_gpt":0.3114439825154781,"score_spread":0.2792006978230384,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}