{"id":"W4388232027","doi":"10.1111/mec.17169","title":"Genomic divergence and introgression between cryptic species of a widespread North American songbird","year":2023,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Denver Museum of Nature and Science; American Ornithological Society","keywords":"Biology; Introgression; Reproductive isolation; White (mutation); Genetic admixture; Songbird; Evolutionary biology; Species complex; Warbler; Population; Hybrid; Lineage (genetic); Hybrid zone; Zoology; Genetic algorithm; Ecology; Gene flow; Genetic variation; Genetics; Habitat; Phylogenetic tree; Botany; Demography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119351,0.0001614142,0.0001863887,0.0006862031,0.0002592697,0.0003048483,0.000191274,0.0002164633,0.000967928],"category_scores_gemma":[0.0002621741,0.0001194934,0.0001970536,0.0004849632,0.0003533793,0.0001977787,0.0003357675,0.0003581151,0.0001072724],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002226355,"about_ca_system_score_gemma":0.0001490313,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003116516,"about_ca_topic_score_gemma":0.01025722,"domain_scores_codex":[0.9998475,0.000009899923,0.000008735085,0.00008951299,0.00002846742,0.00001589169],"domain_scores_gemma":[0.9997745,0.00004935738,0.00006765334,0.00002662902,0.00002794165,0.00005389239],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003126267,0.00007668418,0.4132716,0.0001352046,0.0002200155,0.0003294075,0.001843162,0.000278674,0.5639954,0.0003055249,0.0000972812,0.01913444],"study_design_scores_gemma":[0.000004623812,0.00003499995,0.9976047,0.000004223388,0.00002272121,0.0001812544,0.0001581719,0.0001885307,0.001442959,0.00004541007,0.0003097057,0.000002727792],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994478,0.00006798936,0.0001344368,0.000005964409,9.473974e-7,0.000001822084,0.0001058792,0.000004097027,0.000231158],"genre_scores_gemma":[0.9987367,0.00005411431,0.000477154,0.00002011773,0.000002373801,0.000005280635,0.0005326549,0.000002877375,0.0001687215],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003116516,"threshold_uncertainty_score":0.006196737,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01009704480763288,"score_gpt":0.2330703454195599,"score_spread":0.222973300611927,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}