{"id":"W4388289753","doi":"10.7554/elife.91037.1","title":"Transposable elements regulate thymus development and function","year":2023,"lang":"en","type":"preprint","venue":"","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; University of British Columbia; Institute for Research in Immunology and Cancer","funders":"Centre de recherche du CHU Sainte-Justine","keywords":"Biology; Cell biology; Thymocyte; Transcription factor; T cell; Central tolerance; Immune system; Immunology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001423866,0.0002298348,0.0001301482,0.0003271611,0.0001369861,0.0004801876,0.0001611091,0.0002154509,0.001308352],"category_scores_gemma":[0.0001312066,0.00009753062,0.0001849522,0.0001346703,0.0001659573,0.0001736093,0.0002946567,0.0002875046,0.00032632],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002102204,"about_ca_system_score_gemma":0.0001043447,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003983803,"about_ca_topic_score_gemma":0.0005262531,"domain_scores_codex":[0.9998685,0.00002122182,0.000009320735,0.000038071,0.00002988563,0.00003297974],"domain_scores_gemma":[0.9998311,0.00002340087,0.00006944495,0.00001146615,0.00002565003,0.0000388793],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004497312,0.000005393953,0.001867147,0.00004621665,0.000006824469,0.00006783289,0.00002273019,0.00004218714,0.9948404,0.0001362259,0.00003288064,0.002887149],"study_design_scores_gemma":[0.00002261732,0.000378825,0.141226,0.00006000683,0.00008133725,0.001439659,0.0002738674,0.001870098,0.8425424,0.0004896511,0.01159876,0.00001684175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9786669,0.01267784,0.005130396,0.00008337566,0.00003159104,0.00002413055,0.0007017272,0.0001555652,0.00252839],"genre_scores_gemma":[0.9945627,0.001742922,0.001181717,0.00003110279,0.00001260515,0.00001079031,0.0002803414,0.00001748863,0.002160427],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001308352,"threshold_uncertainty_score":0.004376888,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04276796339496139,"score_gpt":0.2196812236905288,"score_spread":0.1769132602955674,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}