{"id":"W4388293525","doi":"10.1038/s41467-023-42807-0","title":"Multiple parallel origins of parasitic Marine Alveolates","year":2023,"lang":"en","type":"article","venue":"Nature Communications","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Tula Foundation; University of British Columbia Hospital","funders":"Natural Sciences and Engineering Research Council of Canada; Hakai Institute; Akademie Věd České Republiky; Russian Foundation for Basic Research; Government of Canada; Gordon and Betty Moore Foundation","keywords":"Biology; Plastid; Phylogenomics; Lineage (genetic); Evolutionary biology; Protist; Parasitism; Phylogenetics; Dinoflagellate; Gene; Ecology; Genetics; Host (biology); Chloroplast; Clade","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002514079,0.0002493737,0.0002516996,0.000879282,0.0006294877,0.0009195581,0.0003853774,0.0006495973,0.0009939267],"category_scores_gemma":[0.000377957,0.0002916013,0.0002500113,0.000354931,0.0004938119,0.0006332567,0.001281567,0.0004920175,0.0005983704],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004877118,"about_ca_system_score_gemma":0.0002674224,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009008269,"about_ca_topic_score_gemma":0.001925757,"domain_scores_codex":[0.9997303,0.00002342261,0.00001325348,0.000106424,0.00005961605,0.00006708555],"domain_scores_gemma":[0.999655,0.00004501923,0.00006748474,0.00006307258,0.00006985427,0.00009959227],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003652047,0.0000482419,0.2006882,0.0002000972,0.00007793533,0.001235691,0.001727985,0.0003105729,0.7547366,0.005561036,0.0003069568,0.03474161],"study_design_scores_gemma":[0.00001975589,0.0001854717,0.8988606,0.00011369,0.00007049533,0.002750185,0.001548349,0.001419473,0.05648424,0.002079889,0.0364049,0.00006305549],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934157,0.001524612,0.001582294,0.00008225507,0.0000101715,0.00001176116,0.0001996759,0.00004875121,0.003124755],"genre_scores_gemma":[0.9946311,0.0007857923,0.001589126,0.00006362336,0.00001151325,0.00000993146,0.0006608509,0.00002621154,0.002221911],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009939267,"threshold_uncertainty_score":0.003538609,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01919347840985509,"score_gpt":0.2910165281967782,"score_spread":0.2718230497869231,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}