{"id":"W4388406873","doi":"10.1093/molbev/msad238","title":"Deleterious and Adaptive Mutations in Plant Germplasm Conserved Ex Situ","year":2023,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Plant Genetic and Mutation Studies","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Germplasm; Biology; Sunflower; Locus (genetics); Genotype; Agronomy; Biotechnology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000793711,0.00005932225,0.00008309064,0.00002082763,0.0001002609,0.000006231212,0.0000231619,0.00006611295,0.000003567166],"category_scores_gemma":[0.00002233767,0.00002777855,0.00001234391,0.000135647,0.00009324031,0.00001630373,0.00003418965,0.00003775849,0.00001202958],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006602027,"about_ca_system_score_gemma":0.000003691258,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001484415,"about_ca_topic_score_gemma":0.0006522101,"domain_scores_codex":[0.9995494,0.0000619657,0.00008407838,0.0001516295,0.00002513452,0.0001277298],"domain_scores_gemma":[0.9998397,0.00008409507,0.00002314942,0.00001271232,0.00001401386,0.00002638601],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003621998,0.00001120054,0.0554698,0.000002674921,0.00001626093,0.00002577146,0.0001541445,0.00001247481,0.9365141,0.003070292,0.0001201401,0.004566868],"study_design_scores_gemma":[0.0001729574,0.0001406196,0.9903628,0.000007806634,0.000007868229,0.00003102575,0.000478076,0.0006785305,0.001553762,0.006079438,0.0003932045,0.00009396618],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984742,0.0005017176,0.0001376127,0.0005282225,0.00003282269,0.00008689934,0.00006674999,0.00002967157,0.0001420758],"genre_scores_gemma":[0.9995192,0.0001480854,0.00005272595,0.00009452691,0.00001065186,0.00001369486,0.0001314811,3.137577e-7,0.00002935665],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9349604,"threshold_uncertainty_score":0.1132776,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01987339082176998,"score_gpt":0.241023201648965,"score_spread":0.221149810827195,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}