{"id":"W4388488788","doi":"10.1136/ijgc-2023-004815","title":"Comprehensive molecular assessment of mismatch repair deficiency in Lynch associated ovarian cancers using next generation sequencing panel","year":2023,"lang":"en","type":"article","venue":"International Journal of Gynecological Cancer","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"Sinai Health System; University of Toronto; University Health Network; Mount Sinai Hospital; Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"Canadian Cancer Society","keywords":"Medicine; Lynch syndrome; Oncology; Ovarian cancer; DNA mismatch repair; Internal medicine; Gynecology; Cancer","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000345904,0.0003750035,0.0002531486,0.001549606,0.0002781771,0.0004123991,0.0003034385,0.000467568,0.001435244],"category_scores_gemma":[0.001095966,0.0001757013,0.0003526065,0.0006007302,0.0001236479,0.0002090822,0.0004115802,0.0003588748,0.0002008421],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002589199,"about_ca_system_score_gemma":0.0003232703,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003196409,"about_ca_topic_score_gemma":0.005252327,"domain_scores_codex":[0.9997661,0.00003653469,0.00002517786,0.00006980635,0.0000653437,0.00003715401],"domain_scores_gemma":[0.9996892,0.0001087012,0.00006308959,0.00001826928,0.00007316448,0.00004762484],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000950916,0.00009851854,0.7818764,0.0002616527,0.0003674556,0.007042388,0.0004008278,0.002071104,0.1249038,0.0006251673,0.003448897,0.0779528],"study_design_scores_gemma":[0.0000565627,0.0004397412,0.9230198,0.0001685571,0.0005774344,0.01878459,0.0004773075,0.007812118,0.03412569,0.00108804,0.01340674,0.0000434021],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9874978,0.003085948,0.003035552,0.0004677877,0.00004759391,0.00006985211,0.003358403,0.00008434617,0.002352877],"genre_scores_gemma":[0.9922277,0.0009481812,0.003896468,0.0002165177,0.00002414624,0.00003251591,0.001808167,0.00001301323,0.0008331607],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003196409,"threshold_uncertainty_score":0.006355643,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2101806142528443,"score_gpt":0.3982070345294928,"score_spread":0.1880264202766485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}