{"id":"W4388537725","doi":"10.1093/dnares/dsad024","title":"Metagenomic Thermometer","year":2023,"lang":"en","type":"article","venue":"DNA Research","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Dalian Institute of Chemical Physics; Japan Science and Technology Agency; National Bioscience Database Center; Japan Society for the Promotion of Science","keywords":"Metagenomics; Thermometer; Biology; Computational biology; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001326308,0.001111825,0.0008566905,0.001487948,0.0006618895,0.001017121,0.0009453172,0.001096106,0.007200452],"category_scores_gemma":[0.001686488,0.0005917126,0.001022198,0.00146637,0.0003160657,0.001129034,0.001265201,0.001350899,0.004092289],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006190921,"about_ca_system_score_gemma":0.0007424194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007775049,"about_ca_topic_score_gemma":0.001198289,"domain_scores_codex":[0.9986514,0.0001613625,0.00008148787,0.0005468873,0.0004492759,0.0001096543],"domain_scores_gemma":[0.9991989,0.0001731957,0.0001411412,0.000169305,0.000240286,0.00007728871],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.001003304,0.0002021163,0.01951941,0.0006434982,0.0002332385,0.0001998896,0.0003804619,0.004744971,0.8684754,0.004102679,0.01006468,0.09043027],"study_design_scores_gemma":[0.0001120015,0.0005686855,0.02473194,0.0001949407,0.0003519196,0.0005597311,0.0002692289,0.09937311,0.7634959,0.00406005,0.1060369,0.000245503],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.2321194,0.003291986,0.6515512,0.001056407,0.00126425,0.001345818,0.05954413,0.02537543,0.02445149],"genre_scores_gemma":[0.3971041,0.00233083,0.5331022,0.001563245,0.0003362524,0.003142088,0.04296901,0.002562796,0.01688951],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.007200452,"threshold_uncertainty_score":0.02408791,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1419441837301624,"score_gpt":0.4413469501838619,"score_spread":0.2994027664536995,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}