{"id":"W4388594283","doi":"10.1101/2023.11.10.23298377","title":"The recent rapid expansion of multidrug resistant strains of <i>Mycobacterium tuberculosis</i> Ural lineage 4.2 in the Republic of Moldova","year":2023,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Lineage (genetic); Biology; Multiple drug resistance; Mycobacterium tuberculosis; Tuberculosis; Genetics; Gene; Genome; Beijing; Virology; Drug resistance; Medicine; Geography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003639547,0.0002314577,0.0002452081,0.0005636767,0.0002891515,0.0007467456,0.0002426253,0.0002890098,0.0009030294],"category_scores_gemma":[0.0005686523,0.0001122005,0.0002042253,0.0005557148,0.0002885745,0.0002262153,0.0004864176,0.000315412,0.0001952358],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005041975,"about_ca_system_score_gemma":0.0003138426,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02318817,"about_ca_topic_score_gemma":0.02686634,"domain_scores_codex":[0.9997526,0.00006874082,0.00001161449,0.00004890886,0.00001745471,0.0001007684],"domain_scores_gemma":[0.9996774,0.00003411363,0.0001610302,0.00003668541,0.00003704479,0.00005378534],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005134318,0.00002420524,0.9566861,0.00008333173,0.00005842595,0.001132135,0.0006795435,0.0003981564,0.0115826,0.0004833631,0.000806457,0.02755233],"study_design_scores_gemma":[0.000005268936,0.00002203779,0.9972454,0.00001205187,0.000008686832,0.0002232881,0.0002307023,0.0001587382,0.0004962857,0.00003507905,0.001559299,0.000003156802],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977658,0.000449672,0.0001579391,0.0003333459,0.00001885296,0.000005648421,0.0004094062,0.00001715287,0.0008421108],"genre_scores_gemma":[0.9992711,0.0001247719,0.0001319886,0.00004811084,0.000008921255,0.000001775675,0.0002248398,0.000004007136,0.0001844794],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02318817,"threshold_uncertainty_score":0.0461064,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.066151794144084,"score_gpt":0.3417690831139925,"score_spread":0.2756172889699085,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}