{"id":"W4388655672","doi":"10.1128/spectrum.03116-23","title":"The diagnostic accuracy of the GeneXpert ESBL- <i>ampC</i> prototype assay for rapid PCR-based detection of extended-spectrum beta-lactamase genes directly from urine","year":2023,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"GeneXpert MTB/RIF; Urine; Microbiology; Beta-lactamase; Cephalosporin; Biology; Antibiotics; Medicine; Virology; Gene; Tuberculosis; Internal medicine; Escherichia coli; Genetics; Sputum; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003677326,0.0004059267,0.0003576867,0.0009927707,0.0001478316,0.001182947,0.0004663444,0.0007221513,0.0009046933],"category_scores_gemma":[0.009144767,0.000350472,0.0003155966,0.0003370428,0.0005888181,0.0005024411,0.0003442877,0.000258854,0.00039246],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004248338,"about_ca_system_score_gemma":0.0002790039,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001463229,"about_ca_topic_score_gemma":0.001301694,"domain_scores_codex":[0.9962038,0.001565619,0.0002960766,0.0007191344,0.001023903,0.000191446],"domain_scores_gemma":[0.9960921,0.002344807,0.0004737008,0.0002131952,0.0007140979,0.0001620346],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002209996,0.0001823178,0.5727487,0.0004064168,0.000215708,0.0004739515,0.0002410399,0.0007508791,0.3701097,0.0001735737,0.0003810912,0.05210665],"study_design_scores_gemma":[0.0001400747,0.001842249,0.7279605,0.0002037933,0.0003459261,0.007446708,0.0004552535,0.03604062,0.2227919,0.0002783482,0.002411414,0.00008314187],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9907424,0.003168197,0.00473511,0.0000771081,0.00005734402,0.00002382207,0.0002162775,0.00004637435,0.0009333641],"genre_scores_gemma":[0.9958978,0.0002653016,0.003426884,0.00003212025,0.000010736,0.000008557997,0.0001664997,0.000006868574,0.0001851455],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003677326,"threshold_uncertainty_score":0.0194478,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009278074660947214,"score_gpt":0.2380284429069438,"score_spread":0.2287503682459966,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}