{"id":"W4388680196","doi":"10.1016/j.modpat.2023.100384","title":"Canadian Multicentric Pan-TRK (CANTRK) Immunohistochemistry Harmonization Study","year":2023,"lang":"en","type":"article","venue":"Modern Pathology","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; Royal University Hospital; SickKids Foundation; Hospital for Sick Children; Université de Montréal; Hôpital Maisonneuve-Rosemont; William Osler Health System; University of British Columbia; BC Cancer Agency; Sunnybrook Health Science Centre; Queen's University; University of Ottawa; Dalhousie University; McMaster University; Institut universitaire de cardiologie et de pneumologie de Québec; University of Manitoba; University of Calgary; Health Sciences Centre; University of Alberta; University Health Network; Ottawa Hospital; McGill University; McGill University Health Centre; University of Toronto; Saskatchewan Health Authority; Centre Hospitalier de l’Université de Montréal; Université Laval","funders":"Bayer Canada","keywords":"Trk receptor; Immunohistochemistry; Staining; Medicine; Immunostaining; Monoclonal antibody; Pathology; H&E stain; Antibody; Biology; Internal medicine; Immunology; Neurotrophin","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003771782,0.0001702698,0.0002999701,0.0003622298,0.0001610975,0.00002065193,0.0001969068,0.0001891109,0.0001542156],"category_scores_gemma":[0.0004223896,0.0001676483,0.00005916463,0.0006609067,0.00008507516,0.00003942225,0.0001123255,0.00028607,0.0008419639],"about_ca_system_candidate":true,"about_ca_system_consensus":true,"about_ca_system_score_codex":0.0106621,"about_ca_system_score_gemma":0.005904615,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04152866,"about_ca_topic_score_gemma":0.007637725,"domain_scores_codex":[0.998064,0.00009376726,0.0002790784,0.0004925964,0.00033432,0.0007361934],"domain_scores_gemma":[0.9987291,0.00008103001,0.00004939343,0.0006716247,0.000157148,0.000311715],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001631917,0.002956698,0.2469245,0.001080264,0.001138038,0.1354093,0.03803379,0.001882858,0.3970639,0.000186688,0.02933588,0.1443562],"study_design_scores_gemma":[0.07200611,0.001429487,0.2105974,0.0001482966,0.000723017,0.003687439,0.003852465,0.6869677,0.0135489,0.000711708,0.004938589,0.001388905],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956955,0.0004705272,0.0002202878,0.0006191594,0.0002093022,0.0008053916,0.0000191915,0.0002005906,0.00176],"genre_scores_gemma":[0.9941084,0.00007733757,0.00008437707,0.0002388693,0.0001197915,0.0001024973,0.0001759738,0.00005084008,0.00504192],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6850848,"threshold_uncertainty_score":0.999936,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02269537775265568,"score_gpt":0.3197230274370713,"score_spread":0.2970276496844156,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}