{"id":"W4388728627","doi":"10.1038/s41564-023-01519-3","title":"Multiple micronutrient deficiencies in early life cause multi-kingdom alterations in the gut microbiome and intrinsic antibiotic resistance genes in mice","year":2023,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Michael Smith Health Research BC; University of British Columbia","funders":"","keywords":"Resistome; Microbiome; Micronutrient; Biology; Microbiology; Antibiotic resistance; Antibiotics; Micronutrient deficiency; Bacteria; Genetics; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003619341,0.001269183,0.0008929992,0.001535888,0.0004476611,0.0009215992,0.0006669848,0.001599728,0.002557361],"category_scores_gemma":[0.0003545232,0.0008090952,0.0009901196,0.0004791862,0.001217691,0.0006051997,0.0008865323,0.002700803,0.0006111635],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009160239,"about_ca_system_score_gemma":0.0006465165,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001415419,"about_ca_topic_score_gemma":0.002851238,"domain_scores_codex":[0.9993029,0.00008256423,0.00006183681,0.0002153062,0.0001552303,0.0001821776],"domain_scores_gemma":[0.9984639,0.0001489302,0.000660469,0.0001147037,0.00006632067,0.0005457864],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001844527,0.0001732665,0.0008110581,0.00004507584,0.00003033973,0.0002220891,0.0000480542,0.0001513679,0.9950257,0.0002075845,0.00009848503,0.001342458],"study_design_scores_gemma":[0.0003200176,0.002109137,0.02982778,0.00008784024,0.0001917137,0.001242756,0.0003593852,0.00172617,0.9604458,0.0005574896,0.00306519,0.00006673096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9912374,0.001169168,0.00372815,0.0004479051,0.00008737583,0.00004462333,0.002137192,0.0003468549,0.0008014016],"genre_scores_gemma":[0.9805681,0.001620616,0.00514954,0.0004922916,0.00004675903,0.0001653939,0.001379513,0.0004288426,0.01014901],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002557361,"threshold_uncertainty_score":0.008555233,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01599361454981202,"score_gpt":0.2728191349607583,"score_spread":0.2568255204109463,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}