{"id":"W4388744057","doi":"10.1101/2023.11.14.567078","title":"Host-microbiome mutualisms emerge from community interactions among microbes","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Coastal wetland ecosystem dynamics","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Gordon and Betty Moore Foundation","keywords":"Microbiome; Biology; Host (biology); Microbial population biology; Competition (biology); Ecology; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003632786,0.0002567956,0.0002454228,0.0003856989,0.000287549,0.000594788,0.0001522358,0.0002949161,0.001036987],"category_scores_gemma":[0.0006328193,0.0001989808,0.0002376663,0.0001464719,0.0003272406,0.000393993,0.001348478,0.0003555847,0.0001284871],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003607809,"about_ca_system_score_gemma":0.0002095008,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005071234,"about_ca_topic_score_gemma":0.0009933444,"domain_scores_codex":[0.9996445,0.00008554619,0.00002208979,0.0000839705,0.00009495479,0.00006898917],"domain_scores_gemma":[0.9994184,0.0001232705,0.0001976112,0.00005853286,0.00006997273,0.0001322046],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001564611,0.00007290973,0.03426184,0.00008894162,0.00006254329,0.00008759061,0.0001020923,0.0008961763,0.956672,0.0007252049,0.0001291232,0.006745181],"study_design_scores_gemma":[0.00003509265,0.0006980975,0.7962521,0.00003148647,0.00009763385,0.0006901855,0.000828411,0.02660113,0.1665824,0.003492755,0.004634436,0.00005631107],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969779,0.0001331615,0.001751508,0.00004698197,0.000003733801,0.00000843095,0.0001038417,0.00002875974,0.0009457401],"genre_scores_gemma":[0.9988493,0.00002277386,0.0008946029,0.00001988487,0.00000167295,0.000006151533,0.00005473048,0.000003207722,0.0001476155],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001036987,"threshold_uncertainty_score":0.00346911,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01695332232562764,"score_gpt":0.2163671150840789,"score_spread":0.1994137927584513,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}