{"id":"W4388773865","doi":"10.1101/2023.11.15.567292","title":"Co-inoculation with novel nodule-inhabiting bacteria reduces the benefits of legume-rhizobium symbiosis","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Carl R. Woese Institute for Genomic Biology; University of Illinois at Urbana-Champaign; National Science Foundation","keywords":"Rhizobia; Medicago truncatula; Rhizobium; Biology; Symbiosis; Sinorhizobium meliloti; Legume; Root nodule; Sinorhizobium; Nitrogen fixation; Botany; Leghemoglobin; Bacteria; Strain (injury); Host (biology); Medicago; Inoculation; Ecology; Horticulture; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002061854,0.0004434268,0.0005243776,0.0001926091,0.0001434438,0.0005362082,0.0003637527,0.0004409857,0.001141842],"category_scores_gemma":[0.00030886,0.0001675041,0.0002128914,0.0001159368,0.0002186024,0.0001670841,0.0004870686,0.0006684819,0.000248384],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002518083,"about_ca_system_score_gemma":0.0002370838,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001208088,"about_ca_topic_score_gemma":0.002091334,"domain_scores_codex":[0.9995571,0.00009060401,0.00003345032,0.0001032243,0.0001010749,0.0001145814],"domain_scores_gemma":[0.9996101,0.00007858175,0.00008214228,0.00004197258,0.00004438619,0.0001429626],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000877598,0.00005256028,0.0004451206,0.00001720644,0.000006568572,0.00001613637,0.000009751015,0.00001155419,0.9989079,0.000006573724,0.000009201592,0.0004297332],"study_design_scores_gemma":[0.00003774028,0.003840074,0.07984518,0.0000226078,0.00007308716,0.0004833177,0.0003444297,0.00146954,0.9115281,0.00005195993,0.002283483,0.0000204623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989026,0.0003122053,0.0003257354,0.00004484322,0.00001474092,0.00001123981,0.00006243125,0.00002143395,0.0003047388],"genre_scores_gemma":[0.9979953,0.00009250345,0.0007525808,0.00005117049,0.000005759591,0.00001522143,0.0001429417,0.000009413951,0.0009352765],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001208088,"threshold_uncertainty_score":0.003819883,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02325339267445362,"score_gpt":0.2125630468834248,"score_spread":0.1893096542089712,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}