{"id":"W4388858664","doi":"10.1371/journal.pbio.3002395","title":"Openly available illustrations as tools to describe eukaryotic microbial diversity","year":2023,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; University of British Columbia","funders":"University of British Columbia; Gordon and Betty Moore Foundation","keywords":"Biology; Diversity (politics); Tree of life (biology); GRASP; Ecology; Evolutionary biology; Astrobiology; Data science; Computational biology; Computer science; Phylogenetics; Genetics; Sociology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001250507,0.0001269946,0.0001390413,0.0000674016,0.0003660216,0.00002675335,0.0004033852,0.0001964001,0.0004330499],"category_scores_gemma":[0.0001731143,0.0001344717,0.00007041067,0.0002014976,0.00009949628,0.000006487855,0.001104863,0.00008542222,0.004557448],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001737851,"about_ca_system_score_gemma":0.00008260737,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001329537,"about_ca_topic_score_gemma":0.0001074832,"domain_scores_codex":[0.9990125,0.00007687341,0.0001160705,0.0003984077,0.00005618026,0.0003400018],"domain_scores_gemma":[0.9994621,0.00002096962,0.00003303964,0.0002864573,0.00007403623,0.0001233853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001160172,0.00007691479,0.05115055,0.00001494667,0.0001132776,0.00001678777,0.0001634553,0.00002060076,0.8776565,0.0005505959,0.06978124,0.0003391146],"study_design_scores_gemma":[0.001918751,0.002512178,0.08651404,0.00003624279,0.0001617961,0.00005868273,0.0004019903,0.0000487576,0.748828,0.001648155,0.1566025,0.001268934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992648,0.00004592392,0.0001410155,0.0006046842,0.000230293,0.0003417158,0.000284096,0.0000489258,0.005655348],"genre_scores_gemma":[0.9905235,0.00006144911,0.0003761081,0.001420725,0.0001831459,0.00001579267,0.0007467015,0.0000100876,0.006662537],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1288285,"threshold_uncertainty_score":0.9962176,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06345473287850369,"score_gpt":0.2578529868526263,"score_spread":0.1943982539741226,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}