{"id":"W4388870346","doi":"10.1093/mmy/myad119","title":"Genotypic diversity and antifungal susceptibility of <i>Cryptococcus neoformans</i> species complex from China, including the diploid VNIII isolates from HIV-infected patients in Chongqing region","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China; Università degli Studi di Milano","keywords":"Cryptococcus neoformans; Biology; Genotype; Ploidy; Antifungal; Microbiology; Cryptococcus; Cryptococcosis; Genetic diversity; Virology; Genetics; Gene; Medicine; Environmental health","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003235026,0.0001584115,0.0005097815,0.000134576,0.000574683,0.000006837785,0.0001319666,0.000183162,0.000455926],"category_scores_gemma":[0.0008691556,0.0001094045,0.00007163193,0.0003778845,0.0005208113,0.00006047488,0.001179665,0.0004337769,0.00002098512],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000795353,"about_ca_system_score_gemma":0.00003415842,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003699732,"about_ca_topic_score_gemma":0.002092048,"domain_scores_codex":[0.998557,0.000173613,0.0003814878,0.000309087,0.0002629553,0.0003158095],"domain_scores_gemma":[0.9986464,0.0008421605,0.000109155,0.0002157182,0.00007586464,0.0001106349],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001814428,0.0001815506,0.9909214,0.00003315556,0.00007920891,0.00002632147,0.002507866,0.000002877405,0.003729651,0.00004338991,0.00135463,0.0009384772],"study_design_scores_gemma":[0.001888131,0.0002678208,0.9951828,0.00009090501,0.00006240206,0.000002783278,0.0003772206,0.0007629722,0.0001657969,0.000427722,0.0006772603,0.00009425523],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971695,0.0001106738,0.00009095039,0.001337464,0.000342148,0.0004069374,0.00005403904,0.00007369319,0.000414575],"genre_scores_gemma":[0.9989443,0.0004786319,0.00003809097,0.0001941133,0.0001417078,0.00001125127,0.0001402991,0.000009257174,0.00004235437],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0042613,"threshold_uncertainty_score":0.5592912,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04046355689408507,"score_gpt":0.2723868091092339,"score_spread":0.2319232522151488,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}